RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 SLC16A12Q6ZSM3 486 aa14.05□□□□□ -0.16
MDC1-206ENST00000489540 OR2W3Q7Z3T1 314 aa14.05□□□□□ -0.16
MDC1-206ENST00000489540 C3orf56Q8N813 242 aa14.05□□□□□ -0.16
MDC1-206ENST00000489540 OR4F5Q8NH21 305 aa14.05□□□□□ -0.16
MDC1-206ENST00000489540 RFESDQ8TAC1 157 aa14.05□□□□□ -0.16
MDC1-206ENST00000489540 NDNFQ8TB73 568 aa14.05□□□□□ -0.16
MDC1-206ENST00000489540 KIRREL1Q96J84 757 aa14.05□□□□□ -0.16
MDC1-206ENST00000489540 TM2D1Q9BX74 207 aa14.05□□□□□ -0.16
MDC1-206ENST00000489540 C1RLQ9NZP8 487 aa14.05□□□□□ -0.16
MDC1-206ENST00000489540 DPM3Q9P2X0 92 aa14.05□□□□□ -0.16
MDC1-206ENST00000489540 POM121CA8CG34 1229 aa14.04□□□□□ -0.16
MDC1-206ENST00000489540 ORC5O43913 435 aa14.04□□□□□ -0.16
MDC1-206ENST00000489540 NFYBP25208 207 aa14.04□□□□□ -0.16
MDC1-206ENST00000489540 FGF9P31371 208 aaPredicted RBP14.04□□□□□ -0.16
MDC1-206ENST00000489540 UNC119Q13432 240 aa14.04□□□□□ -0.16
MDC1-206ENST00000489540 P2RY14Q15391 338 aa14.04□□□□□ -0.16
MDC1-206ENST00000489540 GAPTQ8N292 157 aa14.04□□□□□ -0.16
MDC1-206ENST00000489540 OR4P4Q8NGL7 312 aa14.04□□□□□ -0.16
MDC1-206ENST00000489540 OR9G1Q8NH87 305 aa14.04□□□□□ -0.16
MDC1-206ENST00000489540 CCDC107Q8WV48 283 aa14.04□□□□□ -0.16
MDC1-206ENST00000489540 URM1Q9BTM9 101 aaKnown RBP14.04□□□□□ -0.16
MDC1-206ENST00000489540 ZNF286AQ9HBT8 521 aa14.04□□□□□ -0.16
MDC1-206ENST00000489540 RAB9BQ9NP90 201 aa14.04□□□□□ -0.16
MDC1-206ENST00000489540 TRAPPC2LQ9UL33 140 aa14.04□□□□□ -0.16
MDC1-206ENST00000489540 MMP24Q9Y5R2 645 aa14.04□□□□□ -0.16
MDC1-206ENST00000489540 TRAV39A0A0B4J263 110 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 UBE2QL1A1L167 161 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 LEUTXA8MZ59 168 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 IGLV1-47P01700 117 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 DYNLT3P51808 116 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 FAM189A2Q15884 450 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 LDLRAD2Q5SZI1 272 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 C22orf42Q6IC83 251 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 LIAT1Q6ZQX7 453 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 DYNAPQ8N1N2 210 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 ARL11Q969Q4 196 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 FAM3DQ96BQ1 224 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 BEX1Q9HBH7 125 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 ABCB10Q9NRK6 738 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 FBLN5Q9UBX5 448 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 STEAP1Q9UHE8 339 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 STUB1Q9UNE7 303 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 SSR3Q9UNL2 185 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 HILPDAQ9Y5L2 63 aa14.03□□□□□ -0.16
MDC1-206ENST00000489540 C15orf65H3BRN8 121 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 TNFAIP8O95379 198 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 PAX6P26367 422 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 CHATP28329 748 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 SSTR5P35346 364 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 CEACAM3P40198 252 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 RAG2P55895 527 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 HLA-DRB5Q30154 266 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 C2orf76Q3KRA6 126 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 NKAPLQ5M9Q1 402 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 C6orf183Q5T699 404 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 DHRS7BQ6IAN0 325 aaPredicted RBP14.02□□□□□ -0.16
MDC1-206ENST00000489540 TRAT1Q6PIZ9 186 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 OR51D1Q8NGF3 324 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 OR52M1Q8NGK5 317 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 PIFOQ8TCI5 191 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 RAB18Q9NP72 206 aa14.02□□□□□ -0.16
MDC1-206ENST00000489540 A0A087WXM4 84 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 FAM172BPA6NC97 362 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 BUB1B-PAK6H3BSN5 160 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 SPINT2O43291 252 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 RAB3BP20337 219 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 CFPP27918 469 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 BLVRBP30043 206 aaPredicted RBP14.01□□□□□ -0.17
MDC1-206ENST00000489540 RELBQ01201 579 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 NEDD8Q15843 81 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 LTC4SQ16873 150 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 FAM89BQ8N5H3 189 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 OR4K15Q8NH41 348 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 TAF15Q92804 592 aaKnown RBP eCLIP14.01□□□□□ -0.17
MDC1-206ENST00000489540 ZNF747Q9BV97 191 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 LPAR5Q9H1C0 372 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 KCNK15Q9H427 330 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 TXNL4BQ9NX01 149 aaKnown RBP14.01□□□□□ -0.17
MDC1-206ENST00000489540 PITPNC1Q9UKF7 332 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 DSCAML1Q8TD84 2053 aa14.01□□□□□ -0.17
MDC1-206ENST00000489540 SHISA3A0PJX4 238 aa14□□□□□ -0.17
MDC1-206ENST00000489540 IFITM5A6NNB3 132 aa14□□□□□ -0.17
MDC1-206ENST00000489540 J3QR06 171 aa14□□□□□ -0.17
MDC1-206ENST00000489540 ARHGDIBP52566 201 aa14□□□□□ -0.17
MDC1-206ENST00000489540 CLDN12P56749 244 aa14□□□□□ -0.17
MDC1-206ENST00000489540 LY6EQ16553 131 aa14□□□□□ -0.17
MDC1-206ENST00000489540 TMEM30BQ3MIR4 351 aa14□□□□□ -0.17
MDC1-206ENST00000489540 PLA1AQ53H76 456 aa14□□□□□ -0.17
MDC1-206ENST00000489540 HES5Q5TA89 166 aa14□□□□□ -0.17
MDC1-206ENST00000489540 ZNF554Q86TJ5 538 aa14□□□□□ -0.17
MDC1-206ENST00000489540 TPRA1Q86W33 373 aa14□□□□□ -0.17
MDC1-206ENST00000489540 TSPAN14Q8NG11 270 aa14□□□□□ -0.17
MDC1-206ENST00000489540 NICN1Q9BSH3 213 aa14□□□□□ -0.17
MDC1-206ENST00000489540 FAAP24Q9BTP7 215 aa14□□□□□ -0.17
MDC1-206ENST00000489540 MMP28Q9H239 520 aa14□□□□□ -0.17
MDC1-206ENST00000489540 VCX3AQ9NNX9 186 aa14□□□□□ -0.17
MDC1-206ENST00000489540 PLEKHJ1Q9NW61 149 aa14□□□□□ -0.17
MDC1-206ENST00000489540 KCNIP1Q9NZI2 227 aa14□□□□□ -0.17
MDC1-206ENST00000489540 RAB22AQ9UL26 194 aa14□□□□□ -0.17
MDC1-206ENST00000489540 PSG11Q9UQ72 335 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms