RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 HDHD3Q9BSH5 251 aaPredicted RBP7.41□□□□□ -1.22
VCP-206ENST00000480327 PECRQ9BY49 303 aa7.41□□□□□ -1.22
VCP-206ENST00000480327 SIRPDQ9H106 197 aa7.41□□□□□ -1.22
VCP-206ENST00000480327 UNKLQ9H9P5 680 aaKnown RBP7.41□□□□□ -1.22
VCP-206ENST00000480327 ZMAT3Q9HA38 289 aaKnown RBP7.41□□□□□ -1.22
VCP-206ENST00000480327 CHMP1AQ9HD42 196 aaPredicted RBP7.41□□□□□ -1.22
VCP-206ENST00000480327 COMMD3Q9UBI1 195 aa7.41□□□□□ -1.22
VCP-206ENST00000480327 LINC00312Q9Y6C7 94 aa7.41□□□□□ -1.22
VCP-206ENST00000480327 TRAV40A0A0B4J280 105 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 A0A1W2PPH5 198 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 FOXI3A8MTJ6 420 aaPredicted RBP7.4□□□□□ -1.22
VCP-206ENST00000480327 MMP23AO75900 390 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 MT-ND4P03905 459 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 ZNF728P0DKX0 622 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 IGHV4-38-2P0DP08 117 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 MMP9P14780 707 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 GNB3P16520 340 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 OMGP23515 440 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 COX7A1P24310 79 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 KCNJ3P48549 501 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 DLX6P56179 175 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 DEFA6Q01524 100 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 FOXL1Q12952 345 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 LTC4SQ16873 150 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 PRAMEF5Q5TYX0 476 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 RUSC1-AS1Q66K80 236 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 SLC35E4Q6ICL7 350 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 BAIAP2L2Q6UXY1 529 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 ZNF497Q6ZNH5 498 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 C5orf24Q7Z6I8 188 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 IZUMO1Q8IYV9 350 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 PNKDQ8N490 385 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 KIR3DL3Q8N743 410 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 SAMD12Q8N8I0 201 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 OR10R2Q8NGX6 335 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 RFESDQ8TAC1 157 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 SETD6Q8TBK2 473 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 PTX4Q96A99 478 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 SLC25A38Q96DW6 304 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 RAB3CQ96E17 227 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 RHBDL2Q9NX52 303 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 ABRACLQ9P1F3 81 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 AK3Q9UIJ7 227 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 ELF5Q9UKW6 265 aaPredicted RBP7.4□□□□□ -1.22
VCP-206ENST00000480327 NUP50Q9UKX7 468 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 TRAPPC2LQ9UL33 140 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 SPATA2Q9UM82 520 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 UBE2J1Q9Y385 318 aaPredicted RBP7.4□□□□□ -1.22
VCP-206ENST00000480327 ETV7Q9Y603 341 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 KPTNQ9Y664 436 aa7.4□□□□□ -1.22
VCP-206ENST00000480327 MDFIC2A0A1B0GVS7 189 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 DPPA5A6NC42 116 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 FAM172BPA6NC97 362 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 C17orf98A8MV24 154 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 H3BUI4 141 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 M0R1W7 72 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 RAB27BO00194 218 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 HPGDSO60760 199 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 GLAP06280 429 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 RNASE1P07998 156 aaKnown RBP7.39□□□□□ -1.23
VCP-206ENST00000480327 ZNF182P17025 639 aaPredicted RBP7.39□□□□□ -1.23
VCP-206ENST00000480327 RCC1P18754 421 aaPredicted RBP7.39□□□□□ -1.23
VCP-206ENST00000480327 FPR2P25090 351 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 SSTR5P35346 364 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 SOX6P35712 828 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 GDNFP39905 211 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 SRSF4Q08170 494 aaKnown RBP7.39□□□□□ -1.23
VCP-206ENST00000480327 MADCAM1Q13477 382 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 SLC9A3R2Q15599 337 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 C17orf58Q2M2W7 97 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 CDNFQ49AH0 187 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 UBE2NLQ5JXB2 153 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 TREML4Q6UXN2 200 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 BRD3OSQ6XYD6 125 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 PRR18Q8N4B5 295 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 C11orf42Q8N5U0 333 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 ZNF565Q8N9K5 539 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 MRPL30Q8TCC3 161 aaKnown RBP7.39□□□□□ -1.23
VCP-206ENST00000480327 PHF21AQ96BD5 680 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 UPRTQ96BW1 309 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 BCL7BQ9BQE9 202 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 RBM38Q9H0Z9 239 aaKnown RBP7.39□□□□□ -1.23
VCP-206ENST00000480327 GAL3ST2Q9H3Q3 398 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 METTL8Q9H825 291 aaKnown RBP7.39□□□□□ -1.23
VCP-206ENST00000480327 CALYQ9NYX4 217 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 OR6C3Q9NZP0 311 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 RSL24D1Q9UHA3 163 aaKnown RBP7.39□□□□□ -1.23
VCP-206ENST00000480327 HSF4Q9ULV5 492 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 KCNK7Q9Y2U2 307 aa7.39□□□□□ -1.23
VCP-206ENST00000480327 TRAV18A0A075B6X5 111 aa7.38□□□□□ -1.23
VCP-206ENST00000480327 CENPVL3A0A0U1RRI6 287 aa7.38□□□□□ -1.23
VCP-206ENST00000480327 hCG_1809904A0A1W2PP81 198 aa7.38□□□□□ -1.23
VCP-206ENST00000480327 A0A1W2PPE2 198 aa7.38□□□□□ -1.23
VCP-206ENST00000480327 A0A1W2PR64 198 aa7.38□□□□□ -1.23
VCP-206ENST00000480327 A0A1W2PRV1 198 aa7.38□□□□□ -1.23
VCP-206ENST00000480327 ZNF729A6NN14 1252 aaPredicted RBP7.38□□□□□ -1.23
VCP-206ENST00000480327 RNASEK-C17orf49H0YIS7 233 aa7.38□□□□□ -1.23
VCP-206ENST00000480327 CLPXO76031 633 aa7.38□□□□□ -1.23
VCP-206ENST00000480327 IGHV3-7P01780 117 aa7.38□□□□□ -1.23
VCP-206ENST00000480327 EIF4EP06730 217 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms