RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 UPK3BQ9BT76 320 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 PKIBQ9C010 78 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 MTCH2Q9Y6C9 303 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 SMARCA4P51532 1647 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 ALPK2Q86TB3 2170 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 DSCAML1Q8TD84 2053 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 COL1A1P02452 1464 aaPredicted RBP-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 HSPG2P98160 4391 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 E7EWF7 191 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 TACSTD2P09758 323 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 CTSEP14091 401 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 RGS8P57771 180 aaPredicted RBP-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 TMEM258P61165 79 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 BSPH1Q075Z2 132 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 C2orf80Q0P641 193 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 GABRG1Q8N1C3 465 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 PIH1D2Q8WWB5 315 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 CCL17Q92583 94 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 MGLLQ99685 303 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 SHCBP1LQ9BZQ2 653 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 CHST5Q9GZS9 411 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 SLC38A1Q9H2H9 487 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 CST9LQ9H4G1 147 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 C6orf50Q9HD87 102 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 CD209Q9NNX6 404 aa-0.58□□□□□ -2.5
NCKAP1-204ENST00000477988 PCLOQ9Y6V0 5065 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 E9PCH4 1651 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 KCNE1BA0A087WTH5 132 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 A0A0D9SG42 100 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 C2orf74A8MZ97 194 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 H3BPC8 53 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 K7EQS6 105 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 UPK2O00526 184 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 CECR9P0C854 216 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 UBCP0CG48 685 aaKnown RBP-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 P2RY2P41231 377 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 CLEC12AQ5QGZ9 265 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 UGT2A3Q6UWM9 527 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 PPP1R42Q7Z4L9 355 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 APRG1Q8IVJ8 170 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 TRAM1L1Q8N609 369 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 ASCC1Q8N9N2 400 aaKnown RBP-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 OR11H1Q8NG94 326 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 FAM81AQ8TBF8 368 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 ZFAND1Q8TCF1 268 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 RILPQ96NA2 401 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 SLC25A31Q9H0C2 315 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 UBQLN4Q9NRR5 601 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 PEF1Q9UBV8 284 aaKnown RBP-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 TFR2Q9UP52 801 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 NAV1Q8NEY1 1877 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 FLNAP21333 2647 aaKnown RBP-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 SRRM2Q9UQ35 2752 aaKnown RBP-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 COL4A5P29400 1685 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 MYO5BQ9ULV0 1848 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 EXPH5Q8NEV8 1989 aa-0.59□□□□□ -2.5
NCKAP1-204ENST00000477988 ZANQ9Y493 2812 aa-0.6□□□□□ -2.5
NCKAP1-204ENST00000477988 ALPK3Q96L96 1907 aa-0.6□□□□□ -2.5
NCKAP1-204ENST00000477988 CPAMD8Q8IZJ3 1885 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 POLQO75417 2590 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 IGHV3OR15-7A0A075B7D8 119 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 MEIKINA0A087WXM9 373 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 MDFIC2A0A1B0GVS7 189 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 RBFOX3A6NFN3 312 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 H3BN98 237 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 TCAPO15273 167 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 CIAO1O76071 339 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 SLC25A16P16260 332 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 ZNF3P17036 446 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 HCCSP53701 268 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 C21orf59P57076 290 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 TAS2R39P59534 338 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 GOLGA7BQ2TAP0 167 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 ANKDD1AQ495B1 522 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 IDNKQ5T6J7 187 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 TMEM42Q69YG0 159 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 TPGS1Q6ZTW0 290 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 SUN5Q8TC36 379 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 TGS1Q96RS0 853 aaKnown RBP-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 COA1Q9GZY4 146 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 DEFB129Q9H1M3 183 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 NEBP20929 6669 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 ABCA2Q9BZC7 2435 aa-0.6□□□□□ -2.51
NCKAP1-204ENST00000477988 TRAV8-3A0A0A6YYJ7 113 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 GRIFINA4D1Z8 144 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 C19orf84I3L1E1 186 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 SIVA1O15304 175 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 DNAJB6O75190 326 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 RPSAP08865 295 aaKnown RBP-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 RNASE3P12724 160 aaKnown RBP-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 MLF1P58340 268 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 YWHAEP62258 255 aaKnown RBP-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 RUNX1Q01196 453 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 GLO1Q04760 184 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 FAM122BQ7Z309 247 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 SETD3Q86TU7 594 aaPredicted RBP-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 RPS19BP1Q86WX3 136 aaKnown RBP-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 C10orf107Q8IVU9 208 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 BBOF1Q8ND07 529 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms