RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 LAX1Q8IWV1 398 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 ELMOD2Q8IZ81 293 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 LINC00311Q8N616 119 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 MAPKAPK5-AS1Q8N8E1 139 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 CHST4Q8NCG5 386 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 OR2T33Q8NG76 320 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 OR10A7Q8NGE5 316 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 OR51T1Q8NGJ9 327 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 ANP32BQ92688 251 aaKnown RBP5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 RITA1Q96K30 269 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 BTBD10Q9BSF8 475 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 MROQ9BYG7 248 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 ANKRD60Q9BZ19 345 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 COMMD4Q9H0A8 199 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 OR51V1Q9H2C8 321 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 SLC2A8Q9NY64 477 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 SLC23A1Q9UHI7 598 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 FBXL7Q9UJT9 491 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 FOXA2Q9Y261 457 aaPredicted RBP5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 GSTK1Q9Y2Q3 226 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 AP3M1Q9Y2T2 418 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 NUBP2Q9Y5Y2 271 aa5.49□□□□□ -1.53
SPTLC1-205ENST00000477888 MEIKINA0A087WXM9 373 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 IGKV1-12A0A0C4DH73 117 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 ZNF254O75437 659 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 CDK2AP2O75956 126 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 IGKV1D-12P01611 117 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 SEMG1P04279 462 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 CLEC2LP0C7M8 214 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 EGR2P11161 476 aaPredicted RBP5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 NCK1P16333 377 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 ZNF3P17036 446 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 CCL1P22362 96 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 C21orf33P30042 268 aaPredicted RBP5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 GLP1RP43220 463 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 HMGA2P52926 109 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 NDPQ00604 133 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 ATXN7L3Q14CW9 347 aaPredicted RBP5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 MMDQ15546 238 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 ECSCRQ19T08 205 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 CD300EQ496F6 205 aaPredicted RBP5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 SAMD4BQ5PRF9 694 aaKnown RBP5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 PYHIN1Q6K0P9 492 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 LIN54Q6MZP7 749 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 CROCCP2Q86T23 111 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 ZNF679Q8IYX0 411 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 RDH10Q8IZV5 341 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 OR2C3Q8N628 320 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 GVQW1Q8N7I0 195 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 TCTEX1D1Q8N7M0 179 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 C8orf31Q8N9H6 132 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 OR2K2Q8NGT1 345 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 FAM162AQ96A26 154 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 MS4A10Q96PG2 267 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 CDIP1Q9H305 208 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 AP5S1Q9NUS5 200 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 CNOT2Q9NZN8 540 aaKnown RBP5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 KIF25Q9UIL4 384 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 LAMP5Q9UJQ1 280 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 ERGIC3Q9Y282 383 aa5.48□□□□□ -1.53
SPTLC1-205ENST00000477888 NME4O00746 187 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 XRCC3O43542 346 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 KDM4BO94953 1096 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 ZNF44P15621 663 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 RRM2P31350 389 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 BMI1P35226 326 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 SSTR5P35346 364 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 ZNF137PP52743 207 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 TCTAP57738 103 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 SCN1BQ07699 218 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 PDZK1IP1Q13113 114 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 CDK5R1Q15078 307 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 LRRC36Q1X8D7 754 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 C5orf64Q2M2E5 130 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 ZNF829Q3KNS6 432 aaPredicted RBP5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 CD200R1LQ6Q8B3 271 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 Q8N1X5 172 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 PRR18Q8N4B5 295 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 OR9Q2Q8NGE9 314 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 MRGPRDQ8TDS7 321 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 OTULINQ96BN8 352 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 TLCD1Q96CP7 247 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 RNF183Q96D59 192 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 BORCS8Q96FH0 119 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 GGTLC1Q9BX51 225 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 CHST5Q9GZS9 411 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 SLA2Q9H6Q3 261 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 INTS9Q9NV88 658 aaKnown RBP5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 ARMC1Q9NVT9 282 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 NDE1Q9NXR1 346 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 TP53TG1Q9Y2A0 90 aa5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 DMBT1Q9UGM3 2413 aaPredicted RBP5.47□□□□□ -1.53
SPTLC1-205ENST00000477888 TRAV39A0A0B4J263 110 aa5.46□□□□□ -1.54
SPTLC1-205ENST00000477888 IGKV1-9A0A0C4DH69 117 aa5.46□□□□□ -1.54
SPTLC1-205ENST00000477888 F8W735 103 aaPredicted RBP5.46□□□□□ -1.54
SPTLC1-205ENST00000477888 DEGS1O15121 323 aa5.46□□□□□ -1.54
SPTLC1-205ENST00000477888 TXNL1O43396 289 aa5.46□□□□□ -1.54
SPTLC1-205ENST00000477888 SPRY2O43597 315 aa5.46□□□□□ -1.54
SPTLC1-205ENST00000477888 GATBO75879 557 aaKnown RBP5.46□□□□□ -1.54
SPTLC1-205ENST00000477888 CYB5AP00167 134 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms