RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 KCNIP2Q9NS61 270 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 FKBP14Q9NWM8 211 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 RMND1Q9NWS8 449 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 EURLQ9NYK6 297 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 ATPIF1Q9UII2 106 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 ZNF337Q9Y3M9 751 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 TIMM22Q9Y584 194 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 URGCP-MRPS24S4R325 110 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 ADCY9O60503 1353 aa1.29□□□□□ -2.2
TARDBP-208ENST00000477447 IGHV2-26A0A0B4J1V2 119 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 KLRC4-KLRK1H3BQV0 150 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 EEF1E1O43324 174 aaKnown RBP1.28□□□□□ -2.2
TARDBP-208ENST00000477447 TRAPPC3O43617 180 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 TCF21O43680 179 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 SCN2BO60939 215 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 ZNF189O75820 626 aaPredicted RBP1.28□□□□□ -2.2
TARDBP-208ENST00000477447 CA2P00918 260 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 APOA1P02647 267 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 OR12D1P0DN82 309 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 IFI30P13284 250 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 CCL2P13500 99 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 CCNOP22674 350 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 SPAM1P38567 509 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 PPP1R2P41236 205 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 CRATP43155 626 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 TSPAN5P62079 268 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 POLR2GP62487 172 aaKnown RBP eCLIP1.28□□□□□ -2.2
TARDBP-208ENST00000477447 VAMP3Q15836 100 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 PYCR3Q53H96 274 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 SAPCD1Q5SSQ6 148 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 PTRHD1Q6GMV3 140 aaKnown RBP1.28□□□□□ -2.2
TARDBP-208ENST00000477447 NIPAL1Q6NVV3 410 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 PPP1R2P3Q6NXS1 205 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 OR7G1Q8NGA0 311 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 OR8J2Q8NGG1 315 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 OR8K1Q8NGG5 319 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 OR2AE1Q8NHA4 323 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 HIST1H2BAQ96A08 127 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 SUCNR1Q9BXA5 334 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 PARD6GQ9BYG4 376 aaPredicted RBP1.28□□□□□ -2.2
TARDBP-208ENST00000477447 MFSD1Q9H3U5 465 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 TUBA4BQ9H853 241 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 EMC3Q9P0I2 261 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 SLC23A2Q9UGH3 650 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 POMPQ9Y244 141 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 TTC21AQ8NDW8 1320 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 RAD50Q92878 1312 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 DOCK6Q96HP0 2047 aa1.28□□□□□ -2.2
TARDBP-208ENST00000477447 ITGB4P16144 1822 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 C1orf232A0A0U1RR37 186 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 ARGFXA6NJG6 315 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 TMEM210A6NLX4 147 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 hCG_2039718K7EN88 272 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 GPR171O14626 319 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 TP53I11O14683 189 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 PDCD6O75340 191 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 AHSA1O95433 338 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 GYPCP04921 128 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 PSKH1P11801 424 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 PSMB6P28072 239 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 PYCR1P32322 319 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 CBX5P45973 191 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 KCNJ3P48549 501 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 EMP2P54851 167 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 ARPC4P59998 168 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 PRDX1Q06830 199 aaKnown RBP1.27□□□□□ -2.21
TARDBP-208ENST00000477447 BAXQ07812 192 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 SLAMF1Q13291 335 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 TRAM1Q15629 374 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 TRIP13Q15645 432 aaPredicted RBP1.27□□□□□ -2.21
TARDBP-208ENST00000477447 USF2Q15853 346 aaPredicted RBP1.27□□□□□ -2.21
TARDBP-208ENST00000477447 ZCWPW2Q504Y3 356 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 C10orf91Q5T1B1 145 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 DGAT2L6Q6ZPD8 337 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 SSX6Q7RTT6 188 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 SCXQ7RTU7 201 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 NIT1Q86X76 327 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 ST13P4Q8IZP2 240 aaPredicted RBP1.27□□□□□ -2.21
TARDBP-208ENST00000477447 ZNF567Q8N184 647 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 ZIC4Q8N9L1 334 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 OR11G2Q8NGC1 345 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 OR2V1Q8NHB1 315 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 SLC35B4Q969S0 331 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 CHMP6Q96FZ7 201 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 B9D2Q9BPU9 175 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 HDHD2Q9H0R4 259 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 ENPP5Q9UJA9 477 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 RPUSD1Q9UJJ7 312 aaKnown RBP1.27□□□□□ -2.21
TARDBP-208ENST00000477447 VPREB3Q9UKI3 123 aa1.27□□□□□ -2.21
TARDBP-208ENST00000477447 RBMX2Q9Y388 322 aaKnown RBP1.27□□□□□ -2.21
TARDBP-208ENST00000477447 PUS1Q9Y606 427 aaKnown RBP eCLIP1.27□□□□□ -2.21
TARDBP-208ENST00000477447 PLB1Q6P1J6 1458 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 TRGV4A0A0C4DH28 118 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 GOLGA8QA0A0J9YX86 632 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 RAB19A4D1S5 217 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 F5H5T6 163 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 GOLGA8MH3BSY2 632 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 I3L4J1 428 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 GOLGA8RI6L899 631 aa1.26□□□□□ -2.21
TARDBP-208ENST00000477447 ITGB1BP1O14713 200 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms