RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 UTS2BQ765I0 119 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 MKXQ8IYA7 352 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 C11orf42Q8N5U0 333 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 DTX3Q8N9I9 347 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 OR2G2Q8NGZ5 317 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 MED28Q9H204 178 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 RAB18Q9NP72 206 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 MTCH1Q9NZJ7 389 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 OR14J1Q9UGF5 321 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 GABARAPH6UMI1 98 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 ANGPTL7O43827 346 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 ALX3O95076 343 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 CYB5AP00167 134 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 PRKACBP22694 351 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 KIR3DL2P43630 455 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 CEBPDP49716 269 aaPredicted RBP10.99□□□□□ -0.65
HMGN1-211ENST00000471260 ATP1B3P54709 279 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 OR10A3P58181 314 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 COL10A1Q03692 680 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 PRB3Q04118 309 aaPredicted RBP10.99□□□□□ -0.65
HMGN1-211ENST00000471260 PNKDQ8N490 385 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 OR56B4Q8NH76 319 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 RNF166Q96A37 237 aaPredicted RBP10.99□□□□□ -0.65
HMGN1-211ENST00000471260 SPSB1Q96BD6 273 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 SNX22Q96L94 193 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 SSX3Q99909 188 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 PPIL3Q9H2H8 161 aaKnown RBP10.99□□□□□ -0.65
HMGN1-211ENST00000471260 GHITMQ9H3K2 345 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 FRRS1LQ9P0K9 344 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 ING4Q9UNL4 249 aa10.99□□□□□ -0.65
HMGN1-211ENST00000471260 IGKV1-27A0A075B6S5 117 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 C17orf98A8MV24 154 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 M0QZ24 198 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 ZNF780AO75290 641 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-211ENST00000471260 ZNF737O75373 536 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 TCRBP04435 133 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 RCVRNP35243 200 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 LGALS4P56470 323 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 GNG2P59768 71 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 MEF2CQ06413 473 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-211ENST00000471260 KLF9Q13886 244 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-211ENST00000471260 LRRC75BQ2VPJ9 315 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 FAM27D1Q5T7N8 215 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 C11orf88Q6PI97 169 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 LIAT1Q6ZQX7 453 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 LHFPL2Q6ZUX7 228 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 SLC25A26Q70HW3 274 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 LGALS14Q8TCE9 139 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 DERL3Q96Q80 235 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 ABHD1Q96SE0 405 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 RHOFQ9HBH0 211 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 FBLN5Q9UBX5 448 aa10.98□□□□□ -0.65
HMGN1-211ENST00000471260 TRBV5-5A0A0J9YX44 114 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 ANKRD34BA5PLL1 514 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 TMEM212A6NML5 194 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 IFITM5A6NNB3 132 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 H3BUX3 64 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 ZNF728P0DKX0 622 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 CCL3L1P16619 93 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 ZNF20P17024 532 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 MTCP1P56278 107 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 SRSF4Q08170 494 aaKnown RBP10.97□□□□□ -0.65
HMGN1-211ENST00000471260 ZNF273Q14593 569 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 ZNF146Q15072 292 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 Q499Y3 187 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 SPIN3Q5JUX0 258 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 THOC7Q6I9Y2 204 aaKnown RBP10.97□□□□□ -0.65
HMGN1-211ENST00000471260 BATF2Q8N1L9 274 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 OR13D1Q8NGV5 346 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 SLAMF9Q96A28 289 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 ADAT3Q96EY9 351 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-211ENST00000471260 AJUBAQ96IF1 538 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 OR14A2Q96R54 314 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 OR51J1Q9H342 316 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 NUDT15Q9NV35 164 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 GLS2Q9UI32 602 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 HHLA2Q9UM44 414 aa10.97□□□□□ -0.65
HMGN1-211ENST00000471260 TBL2Q9Y4P3 447 aaKnown RBP10.97□□□□□ -0.65
HMGN1-211ENST00000471260 IGKV1-9A0A0C4DH69 117 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 hADV38S2A0JD32 116 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 FAM90A8PA6NJQ4 464 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 F8VVB4 439 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 F8VWA3 439 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 H3BSH0 61 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 SRMP19623 302 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 C4BPBP20851 252 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 DLX6P56179 175 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 EDDM3BP56851 147 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 NANOS3P60323 173 aaKnown RBP10.96□□□□□ -0.65
HMGN1-211ENST00000471260 SSBP1Q04837 148 aaKnown RBP10.96□□□□□ -0.65
HMGN1-211ENST00000471260 ALKBH1Q13686 389 aaKnown RBP10.96□□□□□ -0.65
HMGN1-211ENST00000471260 SLC7A5P1Q8MH63 180 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 FAM58AQ8N1B3 248 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 PPP1R35Q8TAP8 253 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 EMG1Q92979 244 aaKnown RBP10.96□□□□□ -0.65
HMGN1-211ENST00000471260 FGGYQ96C11 551 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 MALSU1Q96EH3 234 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 COMMD4Q9H0A8 199 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 PPA2Q9H2U2 334 aa10.96□□□□□ -0.65
HMGN1-211ENST00000471260 TCF7L1Q9HCS4 588 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms