RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 TMPRSS11AQ6ZMR5 421 aa9.86□□□□□ -0.83
SOX2-OT-203ENST00000466034 ETV3LQ6ZN32 361 aa9.86□□□□□ -0.83
SOX2-OT-203ENST00000466034 COMMD1Q8N668 190 aa9.86□□□□□ -0.83
SOX2-OT-203ENST00000466034 OR51D1Q8NGF3 324 aa9.86□□□□□ -0.83
SOX2-OT-203ENST00000466034 OR10X1Q8NGY0 326 aa9.86□□□□□ -0.83
SOX2-OT-203ENST00000466034 OR52N1Q8NH53 320 aa9.86□□□□□ -0.83
SOX2-OT-203ENST00000466034 ZFP57Q9NU63 452 aa9.86□□□□□ -0.83
SOX2-OT-203ENST00000466034 PAK1IP1Q9NWT1 392 aaPredicted RBP9.86□□□□□ -0.83
SOX2-OT-203ENST00000466034 TMEM30CPA0ZSE6 113 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 IRGMA1A4Y4 181 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 C15orf65H3BRN8 121 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 HSD17B6O14756 317 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 GEMIN2O14893 280 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 ORC5O43913 435 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 OR7C1O76099 320 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 CDRT1O95170 752 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 IGKV1D-33P01593 117 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 IGKV1-33P01594 117 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 IGHV3-7P01780 117 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 CSTBP04080 98 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 GAPDHP04406 335 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 IGFBP3P17936 291 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 BDKRB2P30411 391 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 ZNF93P35789 620 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 THBS3P49746 956 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 GNG10P50151 68 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 ETV1P50549 477 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 KRTAP10-11P60412 298 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 PPP3R1P63098 170 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 HES1Q14469 280 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 SMN1Q16637 294 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 LTC4SQ16873 150 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 DDI2Q5TDH0 399 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 MRPL41Q8IXM3 137 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 IZUMO1Q8IYV9 350 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 Q8N6K4 173 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 SMIM19Q96E16 107 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 BABAM2Q9NXR7 383 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 ZNF581Q9P0T4 197 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 ING4Q9UNL4 249 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 SIRT4Q9Y6E7 314 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 COL7A1Q02388 2944 aa9.85□□□□□ -0.83
SOX2-OT-203ENST00000466034 IGHV1-3A0A0C4DH29 117 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 TRBV5-5A0A0J9YX44 114 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 SERPINE3A8MV23 424 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 CCRL2O00421 344 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 SLC35B1P78383 322 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 OR2G6Q5TZ20 316 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 DMKNQ6E0U4 476 aaPredicted RBP9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 ZNF497Q6ZNH5 498 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 OR2W3Q7Z3T1 314 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 SLC35E3Q7Z769 313 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 ZNF329Q86UD4 541 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 TGIF2LXQ8IUE1 241 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 ZNF555Q8NEP9 628 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 ARL11Q969Q4 196 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 NOL4LQ96MY1 436 aaPredicted RBP9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 S100A13Q99584 98 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 MCRIP2Q9BUT9 160 aaKnown RBP9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 GFOD1Q9NXC2 390 aa9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 SMPD3Q9NY59 655 aaPredicted RBP9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 DIMT1Q9UNQ2 313 aaKnown RBP9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 EXOSC1Q9Y3B2 195 aaKnown RBP9.84□□□□□ -0.83
SOX2-OT-203ENST00000466034 TRAV39A0A0B4J263 110 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 WI2-2373I1.2A0A1W2PRP0 233 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 LALBAP00709 142 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 GTF2F2P13984 249 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 FSTP19883 344 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 SERPINA2P20848 420 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 CD1BP29016 333 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 MYCNOSP40205 109 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 ZNF137PP52743 207 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 RIPK1Q13546 671 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 GPR176Q14439 515 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 HNF4GQ14541 408 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 TMEM30BQ3MIR4 351 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 FOXRED2Q8IWF2 684 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 GAPTQ8N292 157 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 STPG2Q8N412 459 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 DPF1Q92782 380 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 ST6GALNAC6Q969X2 333 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 MRPS24Q96EL2 167 aaKnown RBP9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 EAF1Q96JC9 268 aaPredicted RBP9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 ZNF184Q99676 751 aaPredicted RBP9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 SPACA1Q9HBV2 294 aa9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 LIN7CQ9NUP9 197 aaKnown RBP9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 RCC2Q9P258 522 aaKnown RBP9.83□□□□□ -0.84
SOX2-OT-203ENST00000466034 A0A1W2PPE3 182 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 SDCBPO00560 298 aaPredicted RBP9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 MT-ND4P03905 459 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 MYL12AP19105 171 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 IL3RAP26951 378 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 RPS11P62280 158 aaKnown RBP eCLIP9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 MED21Q13503 144 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 Q499Y3 187 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 YIF1BQ5BJH7 314 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 ATAD3CQ5T2N8 411 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 MOB3BQ86TA1 216 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 CDH26Q8IXH8 852 aa9.82□□□□□ -0.84
SOX2-OT-203ENST00000466034 ZNF485Q8NCK3 441 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms