RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 C15orf65H3BRN8 121 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 TOR1AO14656 332 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 CD37P11049 281 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 EFNB2P52799 333 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 BLCAPP62952 87 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 MLLT11Q13015 90 aaPredicted RBP10.41□□□□□ -0.74
XRN1-203ENST00000463916 HSD17B12Q53GQ0 312 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 C1orf100Q5SVJ3 147 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 LIAT1Q6ZQX7 453 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 OR4C13Q8NGP0 309 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 OR9G1Q8NH87 305 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 NEK7Q8TDX7 302 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 ZNF702PQ9H963 129 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 RAB18Q9NP72 206 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 ISYNA1Q9NPH2 558 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 PEX16Q9Y5Y5 336 aa10.41□□□□□ -0.74
XRN1-203ENST00000463916 A0A1W2PPE3 182 aa10.4□□□□□ -0.74
XRN1-203ENST00000463916 J3QR06 171 aa10.4□□□□□ -0.74
XRN1-203ENST00000463916 F2RL2O00254 374 aa10.4□□□□□ -0.74
XRN1-203ENST00000463916 VSIG8P0DPA2 414 aa10.4□□□□□ -0.74
XRN1-203ENST00000463916 PRRX1P54821 245 aa10.4□□□□□ -0.74
XRN1-203ENST00000463916 FABP5Q01469 135 aa10.4□□□□□ -0.74
XRN1-203ENST00000463916 DIAPH2-AS1Q14236 149 aa10.4□□□□□ -0.74
XRN1-203ENST00000463916 TPTE2P1Q5T6R2 138 aa10.4□□□□□ -0.74
XRN1-203ENST00000463916 NPFFR1Q9GZQ6 430 aa10.4□□□□□ -0.74
XRN1-203ENST00000463916 MMP28Q9H239 520 aa10.4□□□□□ -0.74
XRN1-203ENST00000463916 MCRIP1C9JLW8 97 aa10.4□□□□□ -0.75
XRN1-203ENST00000463916 GZMHP20718 246 aa10.4□□□□□ -0.75
XRN1-203ENST00000463916 GNG10P50151 68 aa10.4□□□□□ -0.75
XRN1-203ENST00000463916 C5orf24Q7Z6I8 188 aa10.4□□□□□ -0.75
XRN1-203ENST00000463916 OR4K15Q8NH41 348 aa10.4□□□□□ -0.75
XRN1-203ENST00000463916 ARL11Q969Q4 196 aa10.4□□□□□ -0.75
XRN1-203ENST00000463916 RANBP3Q9H6Z4 567 aaPredicted RBP10.4□□□□□ -0.75
XRN1-203ENST00000463916 SPACA1Q9HBV2 294 aa10.4□□□□□ -0.75
XRN1-203ENST00000463916 ACOT13Q9NPJ3 140 aa10.4□□□□□ -0.75
XRN1-203ENST00000463916 AIPO00170 330 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 SLC22A1O15245 554 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 MPIG6BO95866 241 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 RCC1P18754 421 aaPredicted RBP10.39□□□□□ -0.75
XRN1-203ENST00000463916 FUT3P21217 361 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 LOXL3P58215 753 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 QRFPP83859 136 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 EMX1Q04741 257 aaPredicted RBP10.39□□□□□ -0.75
XRN1-203ENST00000463916 UNC119Q13432 240 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 TBCEQ15813 527 aaPredicted RBP10.39□□□□□ -0.75
XRN1-203ENST00000463916 SSX1Q16384 188 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 SYT6Q5T7P8 510 aaPredicted RBP10.39□□□□□ -0.75
XRN1-203ENST00000463916 GLT8D1Q68CQ7 371 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 GAPTQ8N292 157 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 OR2T6Q8NHC8 308 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 SERTAD4Q9NUC0 356 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 ETAA1Q9NY74 926 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 GHRLQ9UBU3 117 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 PITPNC1Q9UKF7 332 aa10.39□□□□□ -0.75
XRN1-203ENST00000463916 UBE2QL1A1L167 161 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 FAM90A10PA6NDY2 464 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 FAM90A18PA6NE21 464 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 FAM90A16PA6NEW6 464 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 FAM90A20PA6NIJ5 464 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 FAM90A7PA6NKC0 464 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 FAM90A12PA8MX19 464 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 FAM90A5PA8MXJ8 464 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 FAM90A23PA8MXZ1 464 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 C12orf77C9JDV5 145 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 FAM90A15PP0C7V4 464 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 FAM90A13PP0C7W8 464 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 FAM90A14PP0C7W9 464 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 FAM90A24PP0C7X0 464 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 HTR2CP28335 458 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 TREML4Q6UXN2 200 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 Q8N2B8 174 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 OR10A7Q8NGE5 316 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 AK6Q9Y3D8 172 aaKnown RBP10.38□□□□□ -0.75
XRN1-203ENST00000463916 IGHV3-43A0A0B4J1X8 118 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 IGHV3-43DP0DP04 118 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 CEACAM3P40198 252 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 KLHDC1Q8N7A1 406 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 C11orf44Q8N8P7 122 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 CREB3L1Q96BA8 519 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 NICN1Q9BSH3 213 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 CST11Q9H112 138 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 TRAPPC2LQ9UL33 140 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 BLOC1S6Q9UL45 172 aa10.38□□□□□ -0.75
XRN1-203ENST00000463916 A0A0A6YYD4 124 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 SDCBPO00560 298 aaPredicted RBP10.37□□□□□ -0.75
XRN1-203ENST00000463916 DENRO43583 198 aaKnown RBP10.37□□□□□ -0.75
XRN1-203ENST00000463916 ORC5O43913 435 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 PDCD6O75340 191 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 UBBP0CG47 229 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 CALRP27797 417 aaKnown RBP10.37□□□□□ -0.75
XRN1-203ENST00000463916 RPS27AP62979 156 aaKnown RBP10.37□□□□□ -0.75
XRN1-203ENST00000463916 TRAM1Q15629 374 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 TMEM95Q3KNT9 176 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 SULT4A1Q9BR01 284 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 A0A1W2PPI3 338 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 TMEM14DPA8MWL7 114 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 TIMM23O14925 209 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 AMY1AP04745 511 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 AMY2AP04746 511 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 VSIG10L2P0DP72 767 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms