RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 SC5DO75845 299 aa13.61□□□□□ -0.23
TOP3A-202ENST00000461127 MYL9P24844 172 aa13.61□□□□□ -0.23
TOP3A-202ENST00000461127 FGF9P31371 208 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-202ENST00000461127 VBP1P61758 197 aa13.61□□□□□ -0.23
TOP3A-202ENST00000461127 SLC35B1P78383 322 aa13.61□□□□□ -0.23
TOP3A-202ENST00000461127 CTF1Q16619 201 aa13.61□□□□□ -0.23
TOP3A-202ENST00000461127 HSD17B12Q53GQ0 312 aa13.61□□□□□ -0.23
TOP3A-202ENST00000461127 ZNF596Q8TC21 504 aa13.61□□□□□ -0.23
TOP3A-202ENST00000461127 FGGYQ96C11 551 aa13.61□□□□□ -0.23
TOP3A-202ENST00000461127 DGCR14Q96DF8 476 aaKnown RBP13.61□□□□□ -0.23
TOP3A-202ENST00000461127 PIGLQ9Y2B2 252 aa13.61□□□□□ -0.23
TOP3A-202ENST00000461127 ZNF256Q9Y2P7 627 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-202ENST00000461127 LINC00312Q9Y6C7 94 aa13.61□□□□□ -0.23
TOP3A-202ENST00000461127 V9GYS6 101 aa13.61□□□□□ -0.23
TOP3A-202ENST00000461127 TRBV5-7A0A0A0MS05 114 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 DHRS7CA6NNS2 312 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 LEUTXA8MZ59 168 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 ZNF701M0R085 212 aaPredicted RBP13.6□□□□□ -0.23
TOP3A-202ENST00000461127 SLC22A1O15245 554 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 UCHL1P09936 223 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 CALRP27797 417 aaKnown RBP13.6□□□□□ -0.23
TOP3A-202ENST00000461127 NCS1P62166 190 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 EDDM3AQ14507 147 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 ZFAND6Q6FIF0 208 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 OR8H2Q8N162 312 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 OR14K1Q8NGZ2 314 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 DUX3Q96PT4 197 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 ZMAT4Q9H898 229 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 HES4Q9HCC6 221 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 MOB4Q9Y3A3 225 aa13.6□□□□□ -0.23
TOP3A-202ENST00000461127 SEC14L6B5MCN3 397 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 H3BMQ9 156 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 ZNF737O75373 536 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 LY86O95711 162 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 NRASP01111 189 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 CEACAM3P40198 252 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 MNDAP41218 407 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 FAM27D1Q5T7N8 215 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 OR52W1Q6IF63 320 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 RTN4RL2Q86UN3 420 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 SERPINA12Q8IW75 414 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 BATF2Q8N1L9 274 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 ABHD12Q8N2K0 398 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 CREB3L1Q96BA8 519 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 RAX2Q96IS3 184 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 RNF167Q9H6Y7 350 aa13.59□□□□□ -0.23
TOP3A-202ENST00000461127 A6NIN4 97 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 SERPINE3A8MV23 424 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 SNRNP70P08621 437 aaKnown RBP13.58□□□□□ -0.24
TOP3A-202ENST00000461127 OCMP0CE72 109 aaPredicted RBP13.58□□□□□ -0.24
TOP3A-202ENST00000461127 SERPINB10P48595 397 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 PPP3R1P63098 170 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 CCDC144NLQ6NUI1 221 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 Q6ZSR3 168 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 TCF23Q7RTU1 214 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 SBSPONQ8IVN8 264 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 PARP16Q8N5Y8 322 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 OR5D14Q8NGL3 314 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 OR8U1Q8NH10 309 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 C10orf35Q96D05 121 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 ORAI1Q96D31 301 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 ADAT3Q96EY9 351 aaPredicted RBP13.58□□□□□ -0.24
TOP3A-202ENST00000461127 SNX22Q96L94 193 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 NOL4LQ96MY1 436 aaPredicted RBP13.58□□□□□ -0.24
TOP3A-202ENST00000461127 CITED4Q96RK1 184 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 TAS2R4Q9NYW5 299 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 SORL1Q92673 2214 aa13.58□□□□□ -0.24
TOP3A-202ENST00000461127 PDCD5O14737 125 aa13.57□□□□□ -0.24
TOP3A-202ENST00000461127 FAM106CPP0CH98 169 aa13.57□□□□□ -0.24
TOP3A-202ENST00000461127 SRMP19623 302 aa13.57□□□□□ -0.24
TOP3A-202ENST00000461127 TGFBR1P36897 503 aa13.57□□□□□ -0.24
TOP3A-202ENST00000461127 MTNR1BP49286 362 aa13.57□□□□□ -0.24
TOP3A-202ENST00000461127 TRAPPC6BQ86SZ2 158 aa13.57□□□□□ -0.24
TOP3A-202ENST00000461127 PP6455Q8WZ26 134 aa13.57□□□□□ -0.24
TOP3A-202ENST00000461127 PPIL3Q9H2H8 161 aaKnown RBP13.57□□□□□ -0.24
TOP3A-202ENST00000461127 ZCCHC4Q9H5U6 513 aa13.57□□□□□ -0.24
TOP3A-202ENST00000461127 TRAV1-2A0A0B4J238 106 aa13.56□□□□□ -0.24
TOP3A-202ENST00000461127 CDRT1O95170 752 aa13.56□□□□□ -0.24
TOP3A-202ENST00000461127 FSTP19883 344 aa13.56□□□□□ -0.24
TOP3A-202ENST00000461127 RAB3AP20336 220 aa13.56□□□□□ -0.24
TOP3A-202ENST00000461127 SDC2P34741 201 aa13.56□□□□□ -0.24
TOP3A-202ENST00000461127 SPCS2Q15005 226 aa13.56□□□□□ -0.24
TOP3A-202ENST00000461127 CLVS2Q5SYC1 327 aa13.56□□□□□ -0.24
TOP3A-202ENST00000461127 OR13C9Q8NGT0 318 aa13.56□□□□□ -0.24
TOP3A-202ENST00000461127 CHST5Q9GZS9 411 aa13.56□□□□□ -0.24
TOP3A-202ENST00000461127 DCSTAMPQ9H295 470 aa13.56□□□□□ -0.24
TOP3A-202ENST00000461127 NEK6Q9HC98 313 aa13.56□□□□□ -0.24
TOP3A-202ENST00000461127 TRAV8-7A0A075B6U6 113 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 PQLC2LA1A4F0 135 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 TOR1AO14656 332 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 MAS1P04201 325 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 MPZP25189 248 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 ERVK11-1P61568 191 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 MXD1Q05195 221 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 GRK1Q15835 563 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 ZNF260Q3ZCT1 412 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 TEX38Q6PEX7 206 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 UTS2BQ765I0 119 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 TPRA1Q86W33 373 aa13.55□□□□□ -0.24
TOP3A-202ENST00000461127 FOXRED2Q8IWF2 684 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms