RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 HTR1DP28221 377 aa14□□□□□ -0.17
USP39-208ENST00000455732 SSTR5P35346 364 aa14□□□□□ -0.17
USP39-208ENST00000455732 QRFPP83859 136 aa14□□□□□ -0.17
USP39-208ENST00000455732 SSX2Q16385 188 aa14□□□□□ -0.17
USP39-208ENST00000455732 SIGIRRQ6IA17 410 aa14□□□□□ -0.17
USP39-208ENST00000455732 RAB12Q6IQ22 244 aa14□□□□□ -0.17
USP39-208ENST00000455732 ZNF773Q6PK81 442 aa14□□□□□ -0.17
USP39-208ENST00000455732 LINC01006Q8NI28 216 aa14□□□□□ -0.17
USP39-208ENST00000455732 KCNG3Q8TAE7 436 aa14□□□□□ -0.17
USP39-208ENST00000455732 NDNFQ8TB73 568 aa14□□□□□ -0.17
USP39-208ENST00000455732 FAM46BQ96A09 425 aa14□□□□□ -0.17
USP39-208ENST00000455732 CREB3L1Q96BA8 519 aa14□□□□□ -0.17
USP39-208ENST00000455732 RAB18Q9NP72 206 aa14□□□□□ -0.17
USP39-208ENST00000455732 IDI2-AS1Q9NZ38 188 aa14□□□□□ -0.17
USP39-208ENST00000455732 PEX16Q9Y5Y5 336 aa14□□□□□ -0.17
USP39-208ENST00000455732 VWFP04275 2813 aa14□□□□□ -0.17
USP39-208ENST00000455732 MEGF8Q7Z7M0 2845 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 TRDV1A0A1B0GX56 115 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 TMEM14DPA8MWL7 114 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 CCRL2O00421 344 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 WIPF1O43516 503 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 PDCD6O75340 191 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 TSPAN9O75954 239 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 MPIG6BO95866 241 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 MT-ND4P03905 459 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 RPS27AP62979 156 aaKnown RBP13.99□□□□□ -0.17
USP39-208ENST00000455732 HLA-DRB5Q30154 266 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 KCTD21Q4G0X4 260 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 PRR31Q5SQ13 230 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 BRICD5Q6PL45 260 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 SLC16A12Q6ZSM3 486 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 Q6ZSV7 163 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 TM2D1Q9BX74 207 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 TMEM59Q9BXS4 323 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 C16orf95Q9H693 158 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 ZNF696Q9H7X3 374 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 ETAA1Q9NY74 926 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 DPM3Q9P2X0 92 aa13.99□□□□□ -0.17
USP39-208ENST00000455732 TRAV1-2A0A0B4J238 106 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 FAM172BPA6NC97 362 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 C15orf65H3BRN8 121 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 AIPO00170 330 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 ORC5O43913 435 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 RANBP1P43487 201 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 PSMD7P51665 324 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 SRSF4Q08170 494 aaKnown RBP13.98□□□□□ -0.17
USP39-208ENST00000455732 UNC119Q13432 240 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 FAM189A2Q15884 450 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 OR10K2Q6IF99 312 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 OR2W3Q7Z3T1 314 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 OR9G1Q8NH87 305 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 PLGRKTQ9HBL7 147 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 ABCB10Q9NRK6 738 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 TCF19Q9Y242 345 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 AK6Q9Y3D8 172 aaKnown RBP13.98□□□□□ -0.17
USP39-208ENST00000455732 RNF114Q9Y508 228 aa13.98□□□□□ -0.17
USP39-208ENST00000455732 TRAV39A0A0B4J263 110 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 LEUTXA8MZ59 168 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 BUB1B-PAK6H3BSN5 160 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 TOR1AO14656 332 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 NFYBP25208 207 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 PSMB9P28065 219 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 CHATP28329 748 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 PRRX1P54821 245 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 RAB11BQ15907 218 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 LY6EQ16553 131 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 OR52M1Q8NGK5 317 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 MMP28Q9H239 520 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 RANBP3Q9H6Z4 567 aaPredicted RBP13.97□□□□□ -0.17
USP39-208ENST00000455732 FBLN5Q9UBX5 448 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 HILPDAQ9Y5L2 63 aa13.97□□□□□ -0.17
USP39-208ENST00000455732 A6NDX4 124 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 OOSP1A8MZH6 123 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 LY6LH3BQJ8 138 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 ARSBP15848 533 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 CEACAM3P40198 252 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 PROK1P58294 105 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 KRTAP10-3P60369 221 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 TMEM30BQ3MIR4 351 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 PLA1AQ53H76 456 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 UTF1Q5T230 341 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 C6orf183Q5T699 404 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 TRAT1Q6PIZ9 186 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 ZNF554Q86TJ5 538 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 RFESDQ8TAC1 157 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 NEDD4LQ96PU5 975 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 CITED1Q99966 193 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 KCNK15Q9H427 330 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 RAB9BQ9NP90 201 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 MBNL3Q9NUK0 354 aaKnown RBP13.96□□□□□ -0.17
USP39-208ENST00000455732 PITPNC1Q9UKF7 332 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 AMMECR1Q9Y4X0 333 aaPredicted RBP13.96□□□□□ -0.17
USP39-208ENST00000455732 V9GY05 133 aa13.96□□□□□ -0.17
USP39-208ENST00000455732 SHISA3A0PJX4 238 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 C12orf77C9JDV5 145 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 J3QR06 171 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 F2RL2O00254 374 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 PDCD5O14737 125 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 CHST1O43916 411 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 MYL9P24844 172 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms