RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 GZMHP20718 246 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 MYF6P23409 242 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 ZP1P60852 638 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 ISL1P61371 349 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 CFHR3Q02985 330 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 RSU1Q15404 277 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 SRSF7Q16629 238 aaKnown RBP eCLIP14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 PIGYQ3MUY2 71 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 ZNF691Q5VV52 312 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 OR5D14Q8NGL3 314 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 RTN4IP1Q8WWV3 396 aaPredicted RBP14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 ARL11Q969Q4 196 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 UBE2E2Q96LR5 201 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 CITED4Q96RK1 184 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 KLK15Q9H2R5 256 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 ENOPH1Q9UHY7 261 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 ZNF107Q9UII5 783 aaPredicted RBP14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 VSIG4Q9Y279 399 aa14.02□□□□□ -0.17
CHCHD3-203ENST00000448878 TCRBV3S1A0A5B6 114 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 MAGEB3O15480 346 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 HTR3BO95264 441 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 KCNJ3P48549 501 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 GNB1P62873 340 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 KCTD20Q7Z5Y7 419 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 SERPINA12Q8IW75 414 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 ZNF491Q8N8L2 437 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 OR8H1Q8NGG4 311 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 CCDC107Q8WV48 283 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 TNFAIP8L1Q8WVP5 186 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 EME1Q96AY2 570 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 ISOC1Q96CN7 298 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 DPCDQ9BVM2 203 aaPredicted RBP14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 GHITMQ9H3K2 345 aa14.01□□□□□ -0.17
CHCHD3-203ENST00000448878 TRIM64CA6NLI5 447 aa14□□□□□ -0.17
CHCHD3-203ENST00000448878 I3L521 148 aa14□□□□□ -0.17
CHCHD3-203ENST00000448878 SULT1B1O43704 296 aa14□□□□□ -0.17
CHCHD3-203ENST00000448878 POLR2IP36954 125 aaKnown RBP14□□□□□ -0.17
CHCHD3-203ENST00000448878 TMED1Q13445 227 aa14□□□□□ -0.17
CHCHD3-203ENST00000448878 ALKBH1Q13686 389 aaKnown RBP14□□□□□ -0.17
CHCHD3-203ENST00000448878 IL13RA2Q14627 380 aa14□□□□□ -0.17
CHCHD3-203ENST00000448878 ASPHD1Q5U4P2 390 aa14□□□□□ -0.17
CHCHD3-203ENST00000448878 KDM4DQ6B0I6 523 aa14□□□□□ -0.17
CHCHD3-203ENST00000448878 ZDHHC13Q8IUH4 622 aa14□□□□□ -0.17
CHCHD3-203ENST00000448878 SUMF2Q8NBJ7 301 aa14□□□□□ -0.17
CHCHD3-203ENST00000448878 OR8J1Q8NGP2 316 aa14□□□□□ -0.17
CHCHD3-203ENST00000448878 NEK7Q8TDX7 302 aa14□□□□□ -0.17
CHCHD3-203ENST00000448878 RIBC2Q9H4K1 309 aa14□□□□□ -0.17
CHCHD3-203ENST00000448878 DYNC2H1Q8NCM8 4307 aaKnown RBP14□□□□□ -0.17
CHCHD3-203ENST00000448878 G3V318 75 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 SLC16A6O15403 523 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 GYG2O15488 501 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 OR7C1O76099 320 aaPredicted RBP13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 IGF1P05019 195 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 CCR9P51686 369 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 ELP2Q6IA86 826 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 FDX2Q6P4F2 183 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 FAM71E2Q8N5Q1 922 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 TMEM104Q8NE00 496 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 PXT1Q8NFP0 134 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 OR6Q1Q8NGQ2 317 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 TSEN15Q8WW01 171 aaKnown RBP13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 DLX4Q92988 240 aaPredicted RBP13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 CPNE2Q96FN4 548 aaPredicted RBP13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 C4orf36Q96KX1 117 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 CIB1Q99828 191 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 PARP11Q9NR21 331 aa13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 CHCHD3Q9NX63 227 aaKnown RBP13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 HUWE1Q7Z6Z7 4374 aaKnown RBP13.99□□□□□ -0.17
CHCHD3-203ENST00000448878 TMEM30CPA0ZSE6 113 aa13.98□□□□□ -0.17
CHCHD3-203ENST00000448878 SLURP1P55000 103 aa13.98□□□□□ -0.17
CHCHD3-203ENST00000448878 MMDQ15546 238 aa13.98□□□□□ -0.17
CHCHD3-203ENST00000448878 ATAD3CQ5T2N8 411 aa13.98□□□□□ -0.17
CHCHD3-203ENST00000448878 LINC00311Q8N616 119 aa13.98□□□□□ -0.17
CHCHD3-203ENST00000448878 OR52M1Q8NGK5 317 aa13.98□□□□□ -0.17
CHCHD3-203ENST00000448878 ALX4Q9H161 411 aaPredicted RBP13.98□□□□□ -0.17
CHCHD3-203ENST00000448878 GFOD1Q9NXC2 390 aa13.98□□□□□ -0.17
CHCHD3-203ENST00000448878 ZNF581Q9P0T4 197 aa13.98□□□□□ -0.17
CHCHD3-203ENST00000448878 ING4Q9UNL4 249 aa13.98□□□□□ -0.17
CHCHD3-203ENST00000448878 DHDHQ9UQ10 334 aa13.98□□□□□ -0.17
CHCHD3-203ENST00000448878 POMPQ9Y244 141 aa13.98□□□□□ -0.17
CHCHD3-203ENST00000448878 ST3GAL6Q9Y274 331 aa13.98□□□□□ -0.17
CHCHD3-203ENST00000448878 OR4C45A6NMZ5 311 aa13.97□□□□□ -0.17
CHCHD3-203ENST00000448878 GABRPO00591 440 aa13.97□□□□□ -0.17
CHCHD3-203ENST00000448878 SLC31A2O15432 143 aa13.97□□□□□ -0.17
CHCHD3-203ENST00000448878 TXNL1O43396 289 aa13.97□□□□□ -0.17
CHCHD3-203ENST00000448878 RAB3AP20336 220 aa13.97□□□□□ -0.17
CHCHD3-203ENST00000448878 RAB9AP51151 201 aa13.97□□□□□ -0.17
CHCHD3-203ENST00000448878 PRR18Q8N4B5 295 aa13.97□□□□□ -0.17
CHCHD3-203ENST00000448878 CCDC197Q8NCU1 140 aa13.97□□□□□ -0.17
CHCHD3-203ENST00000448878 ST6GALNAC6Q969X2 333 aa13.97□□□□□ -0.17
CHCHD3-203ENST00000448878 PELI1Q96FA3 418 aa13.97□□□□□ -0.17
CHCHD3-203ENST00000448878 CHCHD6Q9BRQ6 235 aa13.97□□□□□ -0.17
CHCHD3-203ENST00000448878 OR51J1Q9H342 316 aa13.97□□□□□ -0.17
CHCHD3-203ENST00000448878 BIRC6Q9NR09 4857 aa13.97□□□□□ -0.17
CHCHD3-203ENST00000448878 C15orf65H3BRN8 121 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 LDLRAD4O15165 306 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 ATP6V0E1O15342 81 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 CDRT1O95170 752 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 CSTBP04080 98 aaKnown RBP13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 PPIFP30405 207 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms