RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 SIGIRRQ6IA17 410 aa19.44■□□□□ 0.7
C9orf3-207ENST00000445181 CHCHD6Q9BRQ6 235 aa19.44■□□□□ 0.7
C9orf3-207ENST00000445181 NICN1Q9BSH3 213 aa19.44■□□□□ 0.7
C9orf3-207ENST00000445181 TRAPPC2LQ9UL33 140 aa19.44■□□□□ 0.7
C9orf3-207ENST00000445181 LOC100506127A0A0U1RQW1 187 aa19.43■□□□□ 0.7
C9orf3-207ENST00000445181 MT-ND4P03905 459 aa19.43■□□□□ 0.7
C9orf3-207ENST00000445181 GZMHP20718 246 aa19.43■□□□□ 0.7
C9orf3-207ENST00000445181 PAX6P26367 422 aa19.43■□□□□ 0.7
C9orf3-207ENST00000445181 SSTR5P35346 364 aa19.43■□□□□ 0.7
C9orf3-207ENST00000445181 RTN4RL2Q86UN3 420 aa19.43■□□□□ 0.7
C9orf3-207ENST00000445181 RFESDQ8TAC1 157 aa19.43■□□□□ 0.7
C9orf3-207ENST00000445181 NDNFQ8TB73 568 aa19.43■□□□□ 0.7
C9orf3-207ENST00000445181 AJUBAQ96IF1 538 aa19.43■□□□□ 0.7
C9orf3-207ENST00000445181 KIRREL1Q96J84 757 aa19.43■□□□□ 0.7
C9orf3-207ENST00000445181 TM2D1Q9BX74 207 aa19.43■□□□□ 0.7
C9orf3-207ENST00000445181 ZNF696Q9H7X3 374 aa19.43■□□□□ 0.7
C9orf3-207ENST00000445181 IDI2-AS1Q9NZ38 188 aa19.43■□□□□ 0.7
C9orf3-207ENST00000445181 NBEAL1Q6ZS30 2694 aa19.42■□□□□ 0.7
C9orf3-207ENST00000445181 TOR1AO14656 332 aa19.42■□□□□ 0.7
C9orf3-207ENST00000445181 CRYBA1P05813 215 aa19.42■□□□□ 0.7
C9orf3-207ENST00000445181 CGB3P0DN86 165 aa19.42■□□□□ 0.7
C9orf3-207ENST00000445181 CGB7P0DN87 165 aa19.42■□□□□ 0.7
C9orf3-207ENST00000445181 GADD45AP24522 165 aa19.42■□□□□ 0.7
C9orf3-207ENST00000445181 C2orf76Q3KRA6 126 aa19.42■□□□□ 0.7
C9orf3-207ENST00000445181 ZNF596Q8TC21 504 aa19.42■□□□□ 0.7
C9orf3-207ENST00000445181 DYRK2Q92630 601 aa19.42■□□□□ 0.7
C9orf3-207ENST00000445181 KCTD7Q96MP8 289 aa19.42■□□□□ 0.7
C9orf3-207ENST00000445181 SSX3Q99909 188 aa19.42■□□□□ 0.7
C9orf3-207ENST00000445181 SMIM30A4D0T7 59 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 FAM181BA6NEQ2 426 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 IFITM5A6NNB3 132 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 CA11O75493 328 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 CHATP28329 748 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 BLVRBP30043 206 aaPredicted RBP19.41■□□□□ 0.7
C9orf3-207ENST00000445181 SSX2Q16385 188 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 LRRC75BQ2VPJ9 315 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 PLA1AQ53H76 456 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 OR4K15Q8NH41 348 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 OR5R1Q8NH85 324 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 ARL11Q969Q4 196 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 MALSU1Q96EH3 234 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 ZNF747Q9BV97 191 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 LPAR5Q9H1C0 372 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 MEGF9Q9H1U4 602 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 ZNF286AQ9HBT8 521 aa19.41■□□□□ 0.7
C9orf3-207ENST00000445181 H3BUX3 64 aa19.4■□□□□ 0.7
C9orf3-207ENST00000445181 HTR1DP28221 377 aa19.4■□□□□ 0.7
C9orf3-207ENST00000445181 PRRX1P54821 245 aa19.4■□□□□ 0.7
C9orf3-207ENST00000445181 C6orf183Q5T699 404 aa19.4■□□□□ 0.7
C9orf3-207ENST00000445181 MINOS1Q5TGZ0 78 aa19.4■□□□□ 0.7
C9orf3-207ENST00000445181 C6orf201Q7Z4U5 140 aa19.4■□□□□ 0.7
C9orf3-207ENST00000445181 TPRA1Q86W33 373 aa19.4■□□□□ 0.7
C9orf3-207ENST00000445181 TAF15Q92804 592 aaKnown RBP eCLIP19.4■□□□□ 0.71e-6■■■■□ 22
C9orf3-207ENST00000445181 FAAP24Q9BTP7 215 aa19.4■□□□□ 0.7
C9orf3-207ENST00000445181 LINC00574Q9H8X3 128 aa19.4■□□□□ 0.7
C9orf3-207ENST00000445181 PLEKHJ1Q9NW61 149 aa19.4■□□□□ 0.7
C9orf3-207ENST00000445181 VPREB3Q9UKI3 123 aa19.4■□□□□ 0.7
C9orf3-207ENST00000445181 MINOS1-NBL1R4GNA1 71 aa19.4■□□□□ 0.7
C9orf3-207ENST00000445181 TMEM272A0A1B0GTI8 110 aa19.39■□□□□ 0.69
C9orf3-207ENST00000445181 NPIPB11E5RHQ5 1161 aa19.39■□□□□ 0.69
C9orf3-207ENST00000445181 CD34P28906 385 aa19.39■□□□□ 0.69
C9orf3-207ENST00000445181 FAM189A2Q15884 450 aa19.39■□□□□ 0.69
C9orf3-207ENST00000445181 GDPGP1Q6ZNW5 385 aa19.39■□□□□ 0.69
C9orf3-207ENST00000445181 OR10A7Q8NGE5 316 aa19.39■□□□□ 0.69
C9orf3-207ENST00000445181 SGMS2Q8NHU3 365 aa19.39■□□□□ 0.69
C9orf3-207ENST00000445181 UBALD1Q8TB05 177 aa19.39■□□□□ 0.69
C9orf3-207ENST00000445181 SULT4A1Q9BR01 284 aa19.39■□□□□ 0.69
C9orf3-207ENST00000445181 LIN7BQ9HAP6 207 aa19.39■□□□□ 0.69
C9orf3-207ENST00000445181 FBLN5Q9UBX5 448 aa19.39■□□□□ 0.69
C9orf3-207ENST00000445181 HILPDAQ9Y5L2 63 aa19.39■□□□□ 0.69
C9orf3-207ENST00000445181 A0A087X0M5 115 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 A0A0A6YYD4 124 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 A0A1B0GX30 115 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 SOCS1O15524 211 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 ORC5O43913 435 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 GPR137BO60478 399 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 IGHV3-7P01780 117 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 VEGFCP49767 419 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 AANATQ16613 207 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 TIMM50Q3ZCQ8 353 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 TRAT1Q6PIZ9 186 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 DYNAPQ8N1N2 210 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 PRR18Q8N4B5 295 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 OR4P4Q8NGL7 312 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 LEAP2Q969E1 77 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 CYYR1Q96J86 154 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 CHMP1AQ9HD42 196 aaPredicted RBP19.38■□□□□ 0.69
C9orf3-207ENST00000445181 RAB9BQ9NP90 201 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 ABCB10Q9NRK6 738 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 RAB22AQ9UL26 194 aa19.38■□□□□ 0.69
C9orf3-207ENST00000445181 NOTOA8MTQ0 251 aa19.37■□□□□ 0.69
C9orf3-207ENST00000445181 SDCBPO00560 298 aaPredicted RBP19.37■□□□□ 0.69
C9orf3-207ENST00000445181 SPINT2O43291 252 aa19.37■□□□□ 0.69
C9orf3-207ENST00000445181 SDC2P34741 201 aa19.37■□□□□ 0.69
C9orf3-207ENST00000445181 LY6EQ16553 131 aa19.37■□□□□ 0.69
C9orf3-207ENST00000445181 LDLRAD2Q5SZI1 272 aa19.37■□□□□ 0.69
C9orf3-207ENST00000445181 SHISA2Q6UWI4 295 aa19.37■□□□□ 0.69
C9orf3-207ENST00000445181 NR2C2APQ86WQ0 139 aa19.37■□□□□ 0.69
C9orf3-207ENST00000445181 GAPTQ8N292 157 aa19.37■□□□□ 0.69
C9orf3-207ENST00000445181 OR56B1Q8NGI3 324 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms