RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 TM4SF5O14894 197 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 GPR37O15354 613 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 SS18L1O75177 396 aaPredicted RBP12.13□□□□□ -0.47
LIMD1-202ENST00000440097 RNF224P0DH78 156 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 OR13C7P0DN81 318 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 HOXC12P31275 282 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 RTP5Q14D33 572 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 RTL6Q6ICC9 239 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 C1QL4Q86Z23 238 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 EMG1Q92979 244 aaKnown RBP12.13□□□□□ -0.47
LIMD1-202ENST00000440097 SLAMF9Q96A28 289 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 BSCL2Q96G97 398 aaPredicted RBP12.13□□□□□ -0.47
LIMD1-202ENST00000440097 RHOVQ96L33 236 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 GLRX2Q9NS18 164 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 CRIM1Q9NZV1 1036 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 CLCF1Q9UBD9 225 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 OSGIN2Q9Y236 505 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 ANKRD30BLA7E2S9 258 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 CD300LBA8K4G0 201 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 FOXI3A8MTJ6 420 aaPredicted RBP12.12□□□□□ -0.47
LIMD1-202ENST00000440097 ZNF732B4DXR9 585 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 OR2C1O95371 312 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 RPS10P46783 165 aaKnown RBP12.12□□□□□ -0.47
LIMD1-202ENST00000440097 NPBWR2P48146 333 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 CAMLGP49069 296 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 RPS23P62266 143 aaKnown RBP12.12□□□□□ -0.47
LIMD1-202ENST00000440097 TBC1D28Q2M2D7 210 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 RPUSD3Q6P087 351 aaKnown RBP12.12□□□□□ -0.47
LIMD1-202ENST00000440097 COMMD1Q8N668 190 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 OR5L1Q8NGL2 311 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 SNIP1Q8TAD8 396 aaKnown RBP12.12□□□□□ -0.47
LIMD1-202ENST00000440097 MARS2Q96GW9 593 aaKnown RBP12.12□□□□□ -0.47
LIMD1-202ENST00000440097 OPA3Q9H6K4 179 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 ZNF442Q9H7R0 627 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 AK3Q9UIJ7 227 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 A0A1B0GV50 99 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 MED19A0JLT2 244 aaPredicted RBP12.12□□□□□ -0.47
LIMD1-202ENST00000440097 AQP7O14520 342 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 DEDDO75618 318 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 C1QL1O75973 258 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 CELA3BP08861 270 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 IGHV1-2P23083 117 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 PTGER4P35408 488 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 WNT5AP41221 380 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 CDX1P47902 265 aaPredicted RBP12.12□□□□□ -0.47
LIMD1-202ENST00000440097 UCP2P55851 309 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 NDUFA6P56556 154 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 FOXC1Q12948 553 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 OR2T2Q6IF00 324 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 HEPN1Q6WQI6 88 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 UBAC2Q8NBM4 344 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 OR10AD1Q8NGE0 317 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 TAAR6Q96RI8 345 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 KCNJ16Q9NPI9 418 aa12.12□□□□□ -0.47
LIMD1-202ENST00000440097 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.12□□□□□ -0.47
LIMD1-202ENST00000440097 FIGNL2A6NMB9 653 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 SCGB1D2O95969 90 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 DANCRP0C864 163 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 S100A2P29034 98 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 MRPL49Q13405 166 aaKnown RBP12.11□□□□□ -0.47
LIMD1-202ENST00000440097 CLINT1Q14677 625 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 VWA1Q6PCB0 445 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 LILRB2Q8N423 598 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 C9orf106Q8NAJ2 232 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 YPEL4Q96NS1 127 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 SLC35B3Q9H1N7 401 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 TLN1Q9Y490 2541 aaKnown RBP12.11□□□□□ -0.47
LIMD1-202ENST00000440097 IGKV1D-8A0A087WSZ0 117 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 SELLP14151 372 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 MAS1LP35410 378 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 DPPA2Q7Z7J5 298 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 CDH20Q9HBT6 801 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 C19orf12Q9NSK7 152 aa12.11□□□□□ -0.47
LIMD1-202ENST00000440097 PUS1Q9Y606 427 aaKnown RBP eCLIP12.11□□□□□ -0.47
LIMD1-202ENST00000440097 A0A1B0GV90 55 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 HSPB6O14558 160 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 RBMXP38159 391 aaKnown RBP12.1□□□□□ -0.47
LIMD1-202ENST00000440097 CEACAM21Q3KPI0 293 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 ALKBH2Q6NS38 261 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 HPSE2Q8WWQ2 592 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 C1orf123Q9NWV4 160 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 GAR1Q9NY12 217 aaKnown RBP12.1□□□□□ -0.47
LIMD1-202ENST00000440097 MMP24Q9Y5R2 645 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 LILRA1O75019 489 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 PRH1P02810 166 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 BCL3P20749 454 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 CA6P23280 308 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 CHATP28329 748 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 RBM11P57052 281 aaKnown RBP12.1□□□□□ -0.47
LIMD1-202ENST00000440097 Q3ZCU0 254 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 MYPOPQ86VE0 399 aaPredicted RBP12.1□□□□□ -0.47
LIMD1-202ENST00000440097 NEK7Q8TDX7 302 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 C14orf144Q96I85 54 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 UFSP2Q9NUQ7 469 aa12.1□□□□□ -0.47
LIMD1-202ENST00000440097 H7C1Q1 480 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 ZNF205O95201 554 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 FOXF2Q12947 444 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 PPA1Q15181 289 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 Q6ZT83 130 aa12.09□□□□□ -0.47
LIMD1-202ENST00000440097 SH3BGRL3Q9H299 93 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms