RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 BRICD5Q6PL45 260 aa13.91□□□□□ -0.18
LMCD1-204ENST00000426878 SHISA2Q6UWI4 295 aa13.91□□□□□ -0.18
LMCD1-204ENST00000426878 NEK7Q8TDX7 302 aa13.91□□□□□ -0.18
LMCD1-204ENST00000426878 FCGR1BQ92637 280 aa13.91□□□□□ -0.18
LMCD1-204ENST00000426878 IDI2-AS1Q9NZ38 188 aa13.91□□□□□ -0.18
LMCD1-204ENST00000426878 PEX16Q9Y5Y5 336 aa13.91□□□□□ -0.18
LMCD1-204ENST00000426878 SLC17A2O00624 439 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 TOR1AO14656 332 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 ORC5O43913 435 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 PDCD6O75340 191 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 MPIG6BO95866 241 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 RANBP1P43487 201 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 PSMD7P51665 324 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 PRRX1P54821 245 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 RPS27AP62979 156 aaKnown RBP13.9□□□□□ -0.18
LMCD1-204ENST00000426878 FAM189A2Q15884 450 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 HLA-DRB5Q30154 266 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 OLFML2AQ68BL7 652 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 Q6ZSV7 163 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 OR9G1Q8NH87 305 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 LINC01006Q8NI28 216 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 NDNFQ8TB73 568 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 FAM46BQ96A09 425 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 TM2D1Q9BX74 207 aa13.9□□□□□ -0.18
LMCD1-204ENST00000426878 TRAV1-2A0A0B4J238 106 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 TRDV1A0A1B0GX56 115 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 TMEM14DPA8MWL7 114 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 LEUTXA8MZ59 168 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 C15orf65H3BRN8 121 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 BUB1B-PAK6H3BSN5 160 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 CCRL2O00421 344 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 SSTR5P35346 364 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 ZNF773Q6PK81 442 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 OR52M1Q8NGK5 317 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 RFESDQ8TAC1 157 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 TMEM59Q9BXS4 323 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 ABCB10Q9NRK6 738 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 ETAA1Q9NY74 926 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 PITPNC1Q9UKF7 332 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 TCF19Q9Y242 345 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 AK6Q9Y3D8 172 aaKnown RBP13.9□□□□□ -0.19
LMCD1-204ENST00000426878 HILPDAQ9Y5L2 63 aa13.9□□□□□ -0.19
LMCD1-204ENST00000426878 TRAV39A0A0B4J263 110 aa13.89□□□□□ -0.19
LMCD1-204ENST00000426878 LY6LH3BQJ8 138 aa13.89□□□□□ -0.19
LMCD1-204ENST00000426878 AIPO00170 330 aa13.89□□□□□ -0.19
LMCD1-204ENST00000426878 NFYBP25208 207 aa13.89□□□□□ -0.19
LMCD1-204ENST00000426878 CEACAM3P40198 252 aa13.89□□□□□ -0.19
LMCD1-204ENST00000426878 UNC119Q13432 240 aa13.89□□□□□ -0.19
LMCD1-204ENST00000426878 LY6EQ16553 131 aa13.89□□□□□ -0.19
LMCD1-204ENST00000426878 UTF1Q5T230 341 aa13.89□□□□□ -0.19
LMCD1-204ENST00000426878 OR10K2Q6IF99 312 aa13.89□□□□□ -0.19
LMCD1-204ENST00000426878 OR2W3Q7Z3T1 314 aa13.89□□□□□ -0.19
LMCD1-204ENST00000426878 MMP28Q9H239 520 aa13.89□□□□□ -0.19
LMCD1-204ENST00000426878 PLGRKTQ9HBL7 147 aa13.89□□□□□ -0.19
LMCD1-204ENST00000426878 FAM172BPA6NC97 362 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 A6NDX4 124 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 OOSP1A8MZH6 123 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 J3QR06 171 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 ARSBP15848 533 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 CHATP28329 748 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 RAB13P51153 203 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 KCTD21Q4G0X4 260 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 SYT6Q5T7P8 510 aaPredicted RBP13.88□□□□□ -0.19
LMCD1-204ENST00000426878 DTX3Q8N9I9 347 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 WFDC12Q8WWY7 111 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 ARL11Q969Q4 196 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 RANBP3Q9H6Z4 567 aaPredicted RBP13.88□□□□□ -0.19
LMCD1-204ENST00000426878 RAB9BQ9NP90 201 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 FBLN5Q9UBX5 448 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 PSG11Q9UQ72 335 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 RNF114Q9Y508 228 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 V9GY05 133 aa13.88□□□□□ -0.19
LMCD1-204ENST00000426878 F2RL2O00254 374 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 KIR2DS4P43632 304 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 PROK1P58294 105 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 RAB11BQ15907 218 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 TMEM30BQ3MIR4 351 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 PLA1AQ53H76 456 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 C6orf183Q5T699 404 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 TRAT1Q6PIZ9 186 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 CCBE1Q6UXH8 406 aaPredicted RBP13.87□□□□□ -0.19
LMCD1-204ENST00000426878 ZNF554Q86TJ5 538 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 FAM89BQ8N5H3 189 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 C8orf31Q8N9H6 132 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 CCDC107Q8WV48 283 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 NEDD4LQ96PU5 975 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 MBNL3Q9NUK0 354 aaKnown RBP13.87□□□□□ -0.19
LMCD1-204ENST00000426878 TRAPPC2LQ9UL33 140 aa13.87□□□□□ -0.19
LMCD1-204ENST00000426878 AMMECR1Q9Y4X0 333 aaPredicted RBP13.87□□□□□ -0.19
LMCD1-204ENST00000426878 TRRAPQ9Y4A5 3859 aa13.86□□□□□ -0.19
LMCD1-204ENST00000426878 PDCD5O14737 125 aa13.86□□□□□ -0.19
LMCD1-204ENST00000426878 CHST1O43916 411 aa13.86□□□□□ -0.19
LMCD1-204ENST00000426878 PSMB9P28065 219 aa13.86□□□□□ -0.19
LMCD1-204ENST00000426878 FGF9P31371 208 aaPredicted RBP13.86□□□□□ -0.19
LMCD1-204ENST00000426878 BRS3P32247 399 aa13.86□□□□□ -0.19
LMCD1-204ENST00000426878 ARHGDIBP52566 201 aa13.86□□□□□ -0.19
LMCD1-204ENST00000426878 LOXL3P58215 753 aa13.86□□□□□ -0.19
LMCD1-204ENST00000426878 Q3ZCU0 254 aa13.86□□□□□ -0.19
LMCD1-204ENST00000426878 TPTE2P1Q5T6R2 138 aa13.86□□□□□ -0.19
LMCD1-204ENST00000426878 CCDC144NLQ6NUI1 221 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms