RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TOR1AO14656 332 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 CA11O75493 328 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 IL1AP01583 271 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 SSTR5P35346 364 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 TGFBR1P36897 503 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 PLA2G7Q13093 441 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 FAM189A2Q15884 450 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 KRTAP21-3Q3LHN1 58 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 BAIAP2L2Q6UXY1 529 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 Q6YL49 198 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 Q6ZTK2 550 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 PRR18Q8N4B5 295 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 ZDHHC22Q8N966 263 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 OR13F1Q8NGS4 319 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 UBALD1Q8TB05 177 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 ATG5Q9H1Y0 275 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 ESM1Q9NQ30 184 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 KCNIP1Q9NZI2 227 aa12.83□□□□□ -0.36
BRAT1-202ENST00000421712 LDLRAD4O15165 306 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 MELTFP08582 738 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 CGB3P0DN86 165 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 CGB7P0DN87 165 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 SNRPBP14678 240 aaKnown RBP12.82□□□□□ -0.36
BRAT1-202ENST00000421712 RAB6AP20340 208 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 CFPP27918 469 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 GDNFP39905 211 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 EFNB2P52799 333 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 PRRX1P54821 245 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 C6orf183Q5T699 404 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 GPR141Q7Z602 305 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 RTN4RL2Q86UN3 420 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 FAM89BQ8N5H3 189 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 OR11H6Q8NGC7 330 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 NDNFQ8TB73 568 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 SETD6Q8TBK2 473 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 C17orf50Q8WW18 174 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 ARHGAP5-AS1Q96IT6 56 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 CYYR1Q96J86 154 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 RAB9BQ9NP90 201 aa12.82□□□□□ -0.36
BRAT1-202ENST00000421712 BTBD17A6NE02 478 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 SPINT2O43291 252 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 ORC5O43913 435 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 IGHV3-7P01780 117 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 SERPINB10P48595 397 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 UBA52P62987 128 aaKnown RBP12.81□□□□□ -0.36
BRAT1-202ENST00000421712 MRPS15P82914 257 aaKnown RBP12.81□□□□□ -0.36
BRAT1-202ENST00000421712 SLC9A3R2Q15599 337 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 TUSC1Q2TAM9 212 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 KRTAP24-1Q3LI83 254 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 GPR107Q5VW38 600 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 ZNF626Q68DY1 528 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 TRAT1Q6PIZ9 186 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 LHFPL4Q7Z7J7 247 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 ZNF596Q8TC21 504 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 SSMEM1Q8WWF3 244 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 LEAP2Q969E1 77 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 KIRREL1Q96J84 757 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 DPAGT1Q9H3H5 408 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 PRDM13Q9H4Q3 707 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 AK3Q9UIJ7 227 aa12.81□□□□□ -0.36
BRAT1-202ENST00000421712 TBL2Q9Y4P3 447 aaKnown RBP12.81□□□□□ -0.36
BRAT1-202ENST00000421712 A0A075B6Q4 140 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 NPIPB11E5RHQ5 1161 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 SDCBPO00560 298 aaPredicted RBP12.8□□□□□ -0.36
BRAT1-202ENST00000421712 RCC1P18754 421 aaPredicted RBP12.8□□□□□ -0.36
BRAT1-202ENST00000421712 PAX6P26367 422 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 RPS19P39019 145 aaKnown RBP12.8□□□□□ -0.36
BRAT1-202ENST00000421712 GNG10P50151 68 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 TMEM50BP56557 158 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 VBP1P61758 197 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 NCS1P62166 190 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 SSX2Q16385 188 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 PLA1AQ53H76 456 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 CROCCP3Q8IVE0 287 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 OR10A7Q8NGE5 316 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 OR10R2Q8NGX6 335 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 MRPL30Q8TCC3 161 aaKnown RBP12.8□□□□□ -0.36
BRAT1-202ENST00000421712 LGALS14Q8TCE9 139 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 PTX4Q96A99 478 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 RAB3CQ96E17 227 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 PECRQ9BY49 303 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 ZMAT3Q9HA38 289 aaKnown RBP12.8□□□□□ -0.36
BRAT1-202ENST00000421712 ZNF286AQ9HBT8 521 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 HSF4Q9ULV5 492 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 HILPDAQ9Y5L2 63 aa12.8□□□□□ -0.36
BRAT1-202ENST00000421712 ODF3BA8MYP8 253 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 C12orf77C9JDV5 145 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 C15orf65H3BRN8 121 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 IGHV4-59P01825 116 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 HBZP02008 142 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 HTR1DP28221 377 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 IER3P46695 156 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 ACTG1P63261 375 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 MOGAT2Q3SYC2 334 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 LDLRAD3Q86YD5 345 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 ANKRD13BQ86YJ7 626 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 GAPTQ8N292 157 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 BEND2Q8NDZ0 799 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 OR9G1Q8NH87 305 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 FAM216AQ8WUB2 273 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms