RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 EDDM3AQ14507 147 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 ODF4Q2M2E3 257 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 C9orf152Q5JTZ5 239 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 C22orf42Q6IC83 251 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 LINC00299Q6ZSB3 139 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 GDPD3Q7L5L3 318 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 COMMD2Q86X83 199 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 ZNF573Q86YE8 665 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 CROCCP3Q8IVE0 287 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 SERPINA12Q8IW75 414 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 PARP16Q8N5Y8 322 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 RGP1Q92546 391 aaPredicted RBP7.55□□□□□ -1.2
RFFL-203ENST00000413582 DUX3Q96PT4 197 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 DERL3Q96Q80 235 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 CENPOQ9BU64 300 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 DPM3Q9P2X0 92 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 DHDHQ9UQ10 334 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 PIGLQ9Y2B2 252 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 LINC00312Q9Y6C7 94 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 V9GYS6 101 aa7.55□□□□□ -1.2
RFFL-203ENST00000413582 hADV38S2A0JD32 116 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 TMEM82A0PJX8 343 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 M0QZK8 103 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 PDCD5O14737 125 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 NRASP01111 189 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 SRMP19623 302 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 SOX6P35712 828 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 NCS1P62166 190 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 CNPY1Q3B7I2 92 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 HSD17B12Q53GQ0 312 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 TMEM42Q69YG0 159 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 BAIAP2L2Q6UXY1 529 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 CDH26Q8IXH8 852 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 RDH10Q8IZV5 341 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 TPRX1Q8N7U7 411 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 OR5D14Q8NGL3 314 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 OR13C3Q8NGS6 347 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 OR14K1Q8NGZ2 314 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 DYNC2LI1Q8TCX1 351 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 TSEN15Q8WW01 171 aaKnown RBP7.54□□□□□ -1.2
RFFL-203ENST00000413582 PP6455Q8WZ26 134 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 TMEM106AQ96A25 262 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 RAX2Q96IS3 184 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 NOL4LQ96MY1 436 aaPredicted RBP7.54□□□□□ -1.2
RFFL-203ENST00000413582 RCHY1Q96PM5 261 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 OR14A2Q96R54 314 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 KRTAP17-1Q9BYP8 105 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 DCSTAMPQ9H295 470 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 ZCCHC4Q9H5U6 513 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 NEK6Q9HC98 313 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 GPR173Q9NS66 373 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 ZFP57Q9NU63 452 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 PTTG2Q9NZH5 202 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 CKLFQ9UBR5 152 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 MOB4Q9Y3A3 225 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 A3GALT2U3KPV4 340 aa7.54□□□□□ -1.2
RFFL-203ENST00000413582 F8VVB4 439 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 F8VWA3 439 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 H3BSH0 61 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 CCL24O00175 119 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 IGLV1-47P01700 117 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 SNRNP70P08621 437 aaKnown RBP7.53□□□□□ -1.2
RFFL-203ENST00000413582 CD37P11049 281 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 LYL1P12980 280 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 IGFBP3P17936 291 aaPredicted RBP7.53□□□□□ -1.2
RFFL-203ENST00000413582 CALRP27797 417 aaKnown RBP7.53□□□□□ -1.2
RFFL-203ENST00000413582 SDC2P34741 201 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 ECI1P42126 302 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 SERPINB10P48595 397 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 RORCP51449 518 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 ARHGDIBP52566 201 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 RAB25P57735 213 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 LSM3P62310 102 aaKnown RBP7.53□□□□□ -1.2
RFFL-203ENST00000413582 IL24Q13007 206 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 SPCS2Q15005 226 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 CLVS2Q5SYC1 327 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 PRAMEF5Q5TYX0 476 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 ZNF529Q6P280 563 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 UTS2BQ765I0 119 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 ZNF695Q8IW36 515 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 ABHD12Q8N2K0 398 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 OR51A4Q8NGJ6 313 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 OR10AC1Q8NH08 325 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 ZNF596Q8TC21 504 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 CHPT1Q8WUD6 406 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 SLC25A46Q96AG3 418 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 SNX22Q96L94 193 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 KRTAP3-3Q9BYR6 98 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 PKIBQ9C010 78 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 CCDC59Q9P031 241 aaKnown RBP7.53□□□□□ -1.2
RFFL-203ENST00000413582 HYDINQ4G0P3 5121 aa7.53□□□□□ -1.2
RFFL-203ENST00000413582 FAM172BPA6NC97 362 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 LEUTXA8MZ59 168 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 CDRT1O95170 752 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 ZNF20P17024 532 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 ZNF182P17025 639 aaPredicted RBP7.52□□□□□ -1.21
RFFL-203ENST00000413582 RAB3BP20337 219 aa7.52□□□□□ -1.21
RFFL-203ENST00000413582 RPS19P39019 145 aaKnown RBP7.52□□□□□ -1.21
RFFL-203ENST00000413582 SOX2P48431 317 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms