RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 CHST4Q8NCG5 386 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 LY6G5BQ8NDX9 201 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 OR5T2Q8NGG2 359 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 SSMEM1Q8WWF3 244 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 ST8SIA4Q92187 359 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 DYRK2Q92630 601 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 RAB3CQ96E17 227 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 Q96M66 194 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 ZNF488Q96MN9 340 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 NEDD4LQ96PU5 975 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 SOSTQ9BQB4 213 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 NICN1Q9BSH3 213 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 POMT1Q9Y6A1 747 aa8.46□□□□□ -1.06
NEDD8-202ENST00000396828 A0A1W2PRD5 423 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 A0A1W2PRF3 423 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 A0A1W2PRM7 423 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 F8VVB4 439 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 F8VWA3 439 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 RAB27BO00194 218 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 SH2D1BO14796 132 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 GEMIN2O14893 280 aaKnown RBP8.45□□□□□ -1.06
NEDD8-202ENST00000396828 OR7C1O76099 320 aaPredicted RBP8.45□□□□□ -1.06
NEDD8-202ENST00000396828 TSPAN15O95858 294 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 SNU13P55769 128 aaKnown RBP8.45□□□□□ -1.06
NEDD8-202ENST00000396828 GMFBP60983 142 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 MRPS10P82664 201 aaKnown RBP8.45□□□□□ -1.06
NEDD8-202ENST00000396828 KLRD1Q13241 179 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 IKZF1Q13422 519 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 IL13RA2Q14627 380 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 PDCD1Q15116 288 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 KCNJ8Q15842 424 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 ACP7Q6ZNF0 438 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 Q6ZTK2 550 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 LDLRAD3Q86YD5 345 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 C1QL4Q86Z23 238 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 SNX29P2Q8IUI4 249 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 Q8N7P7 452 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 FCAMRQ8WWV6 532 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 BORCS5Q969J3 196 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 CCDC32Q9BV29 185 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 SRRQ9GZT4 340 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 WDR13Q9H1Z4 485 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 SPACA1Q9HBV2 294 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 HES4Q9HCC6 221 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 SIRT7Q9NRC8 400 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 PLEKHJ1Q9NW61 149 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 KAAG1Q9UBP8 84 aa8.45□□□□□ -1.06
NEDD8-202ENST00000396828 A0A0A6YYD4 124 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 RNASEK-C17orf49H0YIS7 233 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 J3QRK9 145 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 DEGS1O15121 323 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 CTDSPLO15194 276 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 SOCS1O15524 211 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 NDUFA2O43678 99 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 HLA-DQB1P01920 261 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 GSTP1P09211 210 aaKnown RBP8.44□□□□□ -1.06
NEDD8-202ENST00000396828 HIST1H1DP16402 221 aaKnown RBP8.44□□□□□ -1.06
NEDD8-202ENST00000396828 FUT3P21217 361 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 PRSS3P35030 304 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 INPP1P49441 399 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 MRPS15P82914 257 aaKnown RBP8.44□□□□□ -1.06
NEDD8-202ENST00000396828 SCN1BQ07699 218 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 ZNF146Q15072 292 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 ZNF79Q15937 498 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 MOGAT2Q3SYC2 334 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 CDNFQ49AH0 187 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 NKAPLQ5M9Q1 402 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 ATAD3CQ5T2N8 411 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 OR8H2Q8N162 312 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 Q8N402 240 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 ABHD1Q96SE0 405 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 AUNIPQ9H7T9 357 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 ONECUT1Q9UBC0 465 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 HSF4Q9ULV5 492 aa8.44□□□□□ -1.06
NEDD8-202ENST00000396828 SERPINE3A8MV23 424 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 MCRIP1C9JLW8 97 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 GABARAPH6UMI1 98 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 M0QZ24 198 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 SULT1C2O00338 296 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 PDCD6O75340 191 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 ECDO95905 644 aaPredicted RBP8.43□□□□□ -1.06
NEDD8-202ENST00000396828 ZNF44P15621 663 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 MUC1P15941 1255 aaPredicted RBP8.43□□□□□ -1.06
NEDD8-202ENST00000396828 GNB3P16520 340 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 PAX6P26367 422 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 GNG2P59768 71 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 DCTN2Q13561 401 aaKnown RBP8.43□□□□□ -1.06
NEDD8-202ENST00000396828 ARFRP1Q13795 201 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 RBM39Q14498 530 aaKnown RBP8.43□□□□□ -1.06
NEDD8-202ENST00000396828 PNLIPRP3Q17RR3 467 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 MICBQ29980 383 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 ZNF260Q3ZCT1 412 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 PLAC9Q5JTB6 97 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 TRIQKQ629K1 86 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 NEK7Q8TDX7 302 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 SMIM4Q8WVI0 70 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 C17orf50Q8WW18 174 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 TNFRSF14Q92956 283 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 ARHGAP5-AS1Q96IT6 56 aa8.43□□□□□ -1.06
NEDD8-202ENST00000396828 THAP7Q9BT49 309 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms