RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 ADIPOR1Q96A54 375 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 MRPL37Q9BZE1 423 aaKnown RBP10.93□□□□□ -0.66
BDNF-202ENST00000356660 CUL9Q8IWT3 2517 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 C5orf49A4QMS7 147 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 ZNF814B7Z6K7 855 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 SOD3P08294 240 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 CCL4P13236 92 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 PSMB3P49720 205 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 NUTF2P61970 127 aaKnown RBP10.93□□□□□ -0.66
BDNF-202ENST00000356660 TNFRSF9Q07011 255 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 OR10A7Q8NGE5 316 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 ABHD5Q8WTS1 349 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 AP1S3Q96PC3 154 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 TWSG1Q9GZX9 223 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 GNG12Q9UBI6 72 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 C5orf67F2Z3F1 127 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 MPPED1O15442 326 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 WDR1O75083 606 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 RPLP1P05386 114 aaKnown RBP10.93□□□□□ -0.66
BDNF-202ENST00000356660 CHRNA7P36544 502 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 HBG1P69891 147 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 HBG2P69892 147 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 IZUMO4Q1ZYL8 232 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 SPATA46Q5T0L3 261 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 TMEM108Q6UXF1 575 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 CPEB3Q8NE35 698 aaKnown RBP10.93□□□□□ -0.66
BDNF-202ENST00000356660 APH1AQ96BI3 265 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 MRGPRX4Q96LA9 322 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 ASCL3Q9NQ33 180 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 MYOTQ9UBF9 498 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 PPP1R3CQ9UQK1 317 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 FUT9Q9Y231 359 aa10.93□□□□□ -0.66
BDNF-202ENST00000356660 LRRK1Q38SD2 2015 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 USP34Q70CQ2 3546 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 COL4A6Q14031 1691 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 TSPAN2O60636 221 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 IGHV4-34P06331 123 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 RAB24Q969Q5 203 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 MARS2Q96GW9 593 aaKnown RBP10.92□□□□□ -0.66
BDNF-202ENST00000356660 PITPNC1Q9UKF7 332 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 TP53TG5Q9Y2B4 290 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 PATE3B3GLJ2 98 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 PPYP01298 95 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 ERVFRD-1P60508 538 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 TMPRSS7Q7RTY8 843 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 MUCL1Q96DR8 90 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 C2orf88Q9BSF0 95 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 GCM1Q9NP62 436 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 ZNF106Q9H2Y7 1883 aaKnown RBP10.92□□□□□ -0.66
BDNF-202ENST00000356660 ABCA4P78363 2273 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 ZNF320A2RRD8 509 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 TUSC2O75896 110 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 ACTL6BO94805 426 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 VAMP5O95183 116 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 GALR1P47211 349 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 FNDC7Q5VTL7 733 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 KCNIP4Q6PIL6 250 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 C6orf15Q6UXA7 325 aaPredicted RBP10.92□□□□□ -0.66
BDNF-202ENST00000356660 ADPRHL1Q8NDY3 354 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 PLPPR2Q96GM1 343 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 OR51I2Q9H344 312 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 WNT16Q9UBV4 365 aa10.92□□□□□ -0.66
BDNF-202ENST00000356660 IGKV1-9A0A0C4DH69 117 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 GALNSP34059 522 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 NXPH1P58417 271 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 BAXQ07812 192 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 ZNF774Q6NX45 483 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 MYPOPQ86VE0 399 aaPredicted RBP10.91□□□□□ -0.66
BDNF-202ENST00000356660 OR10S1Q8NGN2 331 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 M1APQ8TC57 530 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 IL22RA2Q969J5 263 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 SCARF2Q96GP6 870 aaPredicted RBP10.91□□□□□ -0.66
BDNF-202ENST00000356660 CBLN4Q9NTU7 201 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 HDGFL3Q9Y3E1 203 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 LOXL2Q9Y4K0 774 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 UBE2L5PA0A1B0GUS4 154 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 MAP1LC3B2A6NCE7 125 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 EDDM3BP56851 147 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 TMEM187Q14656 261 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 ELOBQ15370 118 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 DHRS13Q6UX07 377 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.91□□□□□ -0.66
BDNF-202ENST00000356660 GAPTQ8N292 157 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 GINS3Q9BRX5 216 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 MAP1LC3BQ9GZQ8 125 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 SLC25A22Q9H936 323 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 SLC7A10Q9NS82 523 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 PSENENQ9NZ42 101 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 KIAA2026Q5HYC2 2103 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 A0A1W2PQD3 144 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 IGHV2-5P01817 119 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 SRP19P09132 144 aaKnown RBP10.91□□□□□ -0.66
BDNF-202ENST00000356660 IRF2P14316 349 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 FUT3P21217 361 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 UBE2G2P60604 165 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 ABLIM2Q6H8Q1 611 aa10.91□□□□□ -0.66
BDNF-202ENST00000356660 IGSF23A1L1A6 192 aa10.9□□□□□ -0.66
BDNF-202ENST00000356660 TMEM210A6NLX4 147 aa10.9□□□□□ -0.66
BDNF-202ENST00000356660 MARCH11A6NNE9 402 aa10.9□□□□□ -0.66
BDNF-202ENST00000356660 TIMM8AO60220 97 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms