RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 C11orf87Q6NUJ2 197 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 PRSS54Q6PEW0 395 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 RBPMS2Q6ZRY4 209 aaKnown RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 C5orf17Q8NAS9 161 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 NECAP1Q8NC96 275 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 OR1L3Q8NH93 324 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 GPR78Q96P69 363 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 OR2A5Q96R48 311 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 CBLN4Q9NTU7 201 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 DYSFO75923 2080 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 MED13LQ71F56 2210 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 PQLC2LA1A4F0 135 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 SERINC4A6NH21 518 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 MAGEA5P43359 124 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 SLC10A2Q12908 348 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 GABRA6Q16445 453 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 MICBQ29980 383 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 SAXO2Q658L1 398 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 TAS1R1Q7RTX1 841 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 RBM45Q8IUH3 476 aaKnown RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 OR13G1Q8NGZ3 307 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 GTF3AQ92664 365 aaKnown RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 MS4A3Q96HJ5 214 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 MRGPRX2Q96LB1 330 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 Q96M85 177 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 GABRG3Q99928 467 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 SELENOIQ9C0D9 397 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM242Q9NWH2 141 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 CPAMD8Q8IZJ3 1885 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 K7EMI3 77 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 SDCBPO00560 298 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 TNFSF11O14788 317 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 RER1O15258 196 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 CDX1P47902 265 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 EDDM3BP56851 147 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 UFM1P61960 85 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 PPP2CBP62714 309 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 FAM169BQ8N8A8 192 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM105Q8N8V8 129 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 MYOZ3Q8TDC0 251 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 PSMG3Q9BT73 122 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 MRPL32Q9BYC8 188 aaKnown RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 RPH3ALQ9UNE2 315 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 OR2A25A4D2G3 310 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 CDKN2DP55273 166 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 GFRA1P56159 465 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 INSM1Q01101 510 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ATXN7L3Q14CW9 347 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 SHBQ15464 509 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 C1QL3Q5VWW1 255 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 OR2T2Q6IF00 324 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 PLBD1Q6P4A8 553 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 OR5AR1Q8NGP9 310 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 CLEC4CQ8WTT0 213 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ABHD3Q8WU67 409 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ARPC1AQ92747 370 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 C4orf36Q96KX1 117 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 CHAC1Q9BUX1 264 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 KIR3DX1Q9H7L2 352 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM30AQ9NV96 361 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 TAAR3PQ9P1P4 343 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 NEU3Q9UQ49 428 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 RNF115Q9Y4L5 304 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 OR2W5A6NFC9 320 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 HMGN2P05204 90 aaKnown RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 DSCR4P56555 118 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ERVFC1-1P60608 527 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 PCOLCEQ15113 449 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 PLCXD3Q63HM9 321 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 THSD4Q6ZMP0 1018 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 FAM222BQ8WU58 562 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 RELTQ969Z4 430 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ADOQ96SZ5 270 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF2Q9BSG1 426 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 PRDM13Q9H4Q3 707 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 C19orf53Q9UNZ5 99 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 CTXND1A0A1B0GTU2 59 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 INAFM2P0DMQ5 153 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 CD69Q07108 199 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 UBAC2Q8NBM4 344 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 CCL17Q92583 94 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 ORAI1Q96D31 301 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 FAM210BQ96KR6 192 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 HEXA-AS1Q9H8Q6 139 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 SLC7A10Q9NS82 523 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 TMLHEQ9NVH6 421 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 ELOVL5Q9NYP7 299 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 PSG11Q9UQ72 335 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 WIPI2Q9Y4P8 454 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 R4GMQ9 66 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 TNRC6BQ9UPQ9 1833 aaKnown RBP2.9□□□□□ -1.94
CSMD3-202ENST00000339701 COL4A5P29400 1685 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 A0A0B4J293 547 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 SPTY2D1-AS1A0A0U1RR47 76 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 LINC00862A6NCI5 91 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 IQCF6A8MYZ5 107 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 NDUFS8O00217 210 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 CTSVO60911 334 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 TUSC2O75896 110 aa2.9□□□□□ -1.94
CSMD3-202ENST00000339701 DHRS3O75911 302 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms