RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 SUCNR1Q9BXA5 334 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 DCSTAMPQ9H295 470 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 GAL3ST2Q9H3Q3 398 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 OCEL1Q9H607 264 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 HEXA-AS1Q9H8Q6 139 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 TRAPPC2LQ9UL33 140 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 HSF4Q9ULV5 492 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 KCNK7Q9Y2U2 307 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 SESN1Q9Y6P5 492 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 JMJD1CQ15652 2540 aa10.41□□□□□ -0.74
SS18-202ENST00000269138 A0A075B6Q4 140 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 GNB3P16520 340 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 FPR2P25090 351 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 UBE2E1P51965 193 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 LTC4SQ16873 150 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 TUSC1Q2TAM9 212 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 C9orf139Q6ZV77 190 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 USP43Q70EL4 1123 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 CROCCP3Q8IVE0 287 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 RAB3CQ96E17 227 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 LINC00574Q9H8X3 128 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 ZMAT3Q9HA38 289 aaKnown RBP10.4□□□□□ -0.74
SS18-202ENST00000269138 RHBDL2Q9NX52 303 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 ABRACLQ9P1F3 81 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 ETV7Q9Y603 341 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 CEPT1Q9Y6K0 416 aa10.4□□□□□ -0.74
SS18-202ENST00000269138 A0A0U1RQK1 487 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 METTL21EPA6NDL7 271 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 C12orf77C9JDV5 145 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 NPIPB11E5RHQ5 1161 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 C15orf65H3BRN8 121 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 NPFFO15130 113 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 CA11O75493 328 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 GZMHP20718 246 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 TMBIM6P55061 237 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 SRSF2Q01130 221 aaKnown RBP10.39□□□□□ -0.75
SS18-202ENST00000269138 GUCA2AQ02747 115 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 DEFB112Q30KQ8 113 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 FAM53AQ6NSI3 398 aaPredicted RBP10.39□□□□□ -0.75
SS18-202ENST00000269138 SIGLECL1Q8N7X8 197 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 C17orf50Q8WW18 174 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 ARL11Q969Q4 196 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 KIRREL1Q96J84 757 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 TMEM133Q9H2Q1 129 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 IDI2-AS1Q9NZ38 188 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 ELF5Q9UKW6 265 aaPredicted RBP10.39□□□□□ -0.75
SS18-202ENST00000269138 SPATA2Q9UM82 520 aa10.39□□□□□ -0.75
SS18-202ENST00000269138 MFNGO00587 321 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 NAPSAO96009 420 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 IGHV3-7P01780 117 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 HIST1H1DP16402 221 aaKnown RBP10.38□□□□□ -0.75
SS18-202ENST00000269138 NFYBP25208 207 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 SAA4P35542 130 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 RORCP51449 518 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 SCAND1P57086 179 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 BPIFB3P59826 476 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 DTX3Q8N9I9 347 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 OR13D1Q8NGV5 346 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 OR1L1Q8NH94 360 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 RAB2BQ8WUD1 216 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 LEAP2Q969E1 77 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 ISOC1Q96CN7 298 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 AJUBAQ96IF1 538 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 ZNF286AQ9HBT8 521 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 CHMP1AQ9HD42 196 aaPredicted RBP10.38□□□□□ -0.75
SS18-202ENST00000269138 MBNL3Q9NUK0 354 aaKnown RBP10.38□□□□□ -0.75
SS18-202ENST00000269138 IGHV2-26A0A0B4J1V2 119 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 MEIOCA2RUB1 952 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 H3BMQ9 156 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 ORC5O43913 435 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 TMEM127O75204 238 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 ARG1P05089 322 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 PAX6P26367 422 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 SCGB2A2Q13296 93 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 DYNC1I2Q13409 638 aaKnown RBP10.38□□□□□ -0.75
SS18-202ENST00000269138 FAM189A2Q15884 450 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 CDNFQ49AH0 187 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 LDLRAD2Q5SZI1 272 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 ZNF880Q6PDB4 577 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 LHFPL4Q7Z7J7 247 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 ABHD12Q8N2K0 398 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 PRR18Q8N4B5 295 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 SAMD12Q8N8I0 201 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 OR11H6Q8NGC7 330 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 SETD6Q8TBK2 473 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 CMSS1Q9BQ75 279 aaKnown RBP10.38□□□□□ -0.75
SS18-202ENST00000269138 TAF9BQ9HBM6 251 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 ZNRD1Q9P1U0 126 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 COMMD3Q9UBI1 195 aa10.38□□□□□ -0.75
SS18-202ENST00000269138 C2CD3Q4AC94 2353 aa10.37□□□□□ -0.75
SS18-202ENST00000269138 IGHV3-43A0A0B4J1X8 118 aa10.37□□□□□ -0.75
SS18-202ENST00000269138 ODF3BA8MYP8 253 aa10.37□□□□□ -0.75
SS18-202ENST00000269138 HBZP02008 142 aa10.37□□□□□ -0.75
SS18-202ENST00000269138 IGHV3-43DP0DP04 118 aa10.37□□□□□ -0.75
SS18-202ENST00000269138 RIPPLY3P57055 190 aa10.37□□□□□ -0.75
SS18-202ENST00000269138 C6orf183Q5T699 404 aa10.37□□□□□ -0.75
SS18-202ENST00000269138 ZNF626Q68DY1 528 aa10.37□□□□□ -0.75
SS18-202ENST00000269138 OR52W1Q6IF63 320 aa10.37□□□□□ -0.75
SS18-202ENST00000269138 IZUMO1Q8IYV9 350 aa10.37□□□□□ -0.75
SS18-202ENST00000269138 KCTD12Q96CX2 325 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms