RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 SMPD2O60906 423 aa15.78■□□□□ 0.12
COL5A3-201ENST00000264828 WFDC3Q8IUB2 231 aa15.78■□□□□ 0.12
COL5A3-201ENST00000264828 B4DEV8 164 aa15.78■□□□□ 0.12
COL5A3-201ENST00000264828 TCF21O43680 179 aa15.78■□□□□ 0.12
COL5A3-201ENST00000264828 CORTO00230 105 aa15.78■□□□□ 0.12
COL5A3-201ENST00000264828 PLA2G10O15496 165 aa15.78■□□□□ 0.12
COL5A3-201ENST00000264828 SURF2Q15527 256 aaPredicted RBP15.78■□□□□ 0.12
COL5A3-201ENST00000264828 LDLRAD3Q86YD5 345 aa15.78■□□□□ 0.12
COL5A3-201ENST00000264828 PTP4A1Q93096 173 aa15.78■□□□□ 0.12
COL5A3-201ENST00000264828 ADTRPQ96IZ2 230 aa15.78■□□□□ 0.12
COL5A3-201ENST00000264828 CLN8Q9UBY8 286 aa15.78■□□□□ 0.12
COL5A3-201ENST00000264828 NUP205Q92621 2012 aa15.78■□□□□ 0.12
COL5A3-201ENST00000264828 PDE6DO43924 150 aa15.77■□□□□ 0.12
COL5A3-201ENST00000264828 SNRPCP09234 159 aaKnown RBP15.77■□□□□ 0.12
COL5A3-201ENST00000264828 BPIFA4PQ86YQ2 179 aa15.77■□□□□ 0.12
COL5A3-201ENST00000264828 DEDDO75618 318 aa15.77■□□□□ 0.12
COL5A3-201ENST00000264828 SMIM6P0DI80 62 aa15.77■□□□□ 0.12
COL5A3-201ENST00000264828 HSPB8Q9UJY1 196 aa15.77■□□□□ 0.12
COL5A3-201ENST00000264828 TRAV38-1A0A0B4J264 116 aa15.77■□□□□ 0.12
COL5A3-201ENST00000264828 SIGLEC5O15389 551 aa15.77■□□□□ 0.12
COL5A3-201ENST00000264828 SIGLEC14Q08ET2 396 aa15.77■□□□□ 0.12
COL5A3-201ENST00000264828 HIKESHIQ53FT3 197 aa15.77■□□□□ 0.12
COL5A3-201ENST00000264828 C1orf53Q5VUE5 145 aa15.77■□□□□ 0.12
COL5A3-201ENST00000264828 STPG2Q8N412 459 aa15.77■□□□□ 0.12
COL5A3-201ENST00000264828 COL4A1P02462 1669 aa15.77■□□□□ 0.12
COL5A3-201ENST00000264828 PLXNB2O15031 1838 aa15.77■□□□□ 0.12
COL5A3-201ENST00000264828 A0A1W2PPE3 182 aa15.77■□□□□ 0.11
COL5A3-201ENST00000264828 FBLL1A6NHQ2 334 aaKnown RBP15.77■□□□□ 0.11
COL5A3-201ENST00000264828 KHDC3LQ587J8 217 aa15.77■□□□□ 0.11
COL5A3-201ENST00000264828 ALG14Q96F25 216 aa15.77■□□□□ 0.11
COL5A3-201ENST00000264828 GABRG3Q99928 467 aa15.77■□□□□ 0.11
COL5A3-201ENST00000264828 KLK13Q9UKR3 277 aa15.77■□□□□ 0.11
COL5A3-201ENST00000264828 IFITM10A6NMD0 228 aa15.77■□□□□ 0.11
COL5A3-201ENST00000264828 PKIAP61925 76 aa15.77■□□□□ 0.11
COL5A3-201ENST00000264828 SSX8Q7RTT4 187 aa15.77■□□□□ 0.11
COL5A3-201ENST00000264828 ZAR1Q86SH2 424 aa15.77■□□□□ 0.11
COL5A3-201ENST00000264828 RAB1BQ9H0U4 201 aa15.77■□□□□ 0.11
COL5A3-201ENST00000264828 A6NDN8 102 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 FAM222BQ8WU58 562 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 ASB5Q8WWX0 329 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 TBX15Q96SF7 602 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 GCSHP23434 173 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 PRNTQ86SH4 94 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 F2RL2O00254 374 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 OR8B3Q8NGG8 313 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 VSTM2AQ8TAG5 236 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 OR8B2Q96RD0 313 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 VDAC1P21796 283 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 C21orf58P58505 322 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 PSG6Q00889 435 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 TFF2Q03403 129 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 RASL10BQ96S79 203 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 OR2H1Q9GZK4 316 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 CXorf1O96002 111 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 NMUP48645 174 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 DLX1P56177 255 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 ZNF79Q15937 498 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 C10orf111Q8N326 155 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 OR5R1Q8NH85 324 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 MYOZ3Q8TDC0 251 aa15.76■□□□□ 0.11
COL5A3-201ENST00000264828 CDX2Q99626 313 aaPredicted RBP15.76■□□□□ 0.11
COL5A3-201ENST00000264828 DRD3P35462 400 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 RAC3P60763 192 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 M0QZK8 103 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 GGCTO75223 188 aaKnown RBP15.75■□□□□ 0.11
COL5A3-201ENST00000264828 PRSS23O95084 383 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 PERPQ96FX8 193 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 COX14Q96I36 57 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 UCN2Q96RP3 112 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 SCN9AQ15858 1988 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 MMP9P14780 707 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 AESQ08117 197 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 LBHQ53QV2 105 aaPredicted RBP15.75■□□□□ 0.11
COL5A3-201ENST00000264828 MFSD2BA6NFX1 497 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 SLC35B1P78383 322 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 ARL6IP6Q8N6S5 226 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 ATG101Q9BSB4 218 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 ZNF552Q9H707 407 aaPredicted RBP15.75■□□□□ 0.11
COL5A3-201ENST00000264828 SIRT7Q9NRC8 400 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 ATAD5Q96QE3 1844 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 REG1BP48304 166 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 GABRA6Q16445 453 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 MRGPRGQ86SM5 289 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 MRPL30Q8TCC3 161 aaKnown RBP15.75■□□□□ 0.11
COL5A3-201ENST00000264828 ADAT3Q96EY9 351 aaPredicted RBP15.75■□□□□ 0.11
COL5A3-201ENST00000264828 HARBI1Q96MB7 349 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 PARP11Q9NR21 331 aa15.75■□□□□ 0.11
COL5A3-201ENST00000264828 TTC3P53804 2025 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 HOXC4P09017 264 aaPredicted RBP15.74■□□□□ 0.11
COL5A3-201ENST00000264828 SMUG1Q53HV7 270 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 UBTD1Q9HAC8 227 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 DIRC3C9JPN6 131 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 VSIG8P0DPA2 414 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 CD99P14209 185 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 CLDN18P56856 261 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 LINC00862A6NCI5 91 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 RAB29O14966 203 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 UQCRFS1P47985 274 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 M0R3E3 92 aa15.74■□□□□ 0.11
COL5A3-201ENST00000264828 ATP6V0CP27449 155 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms