RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 LSM6P62312 80 aaKnown RBP12.09□□□□□ -0.47
HCFC2-201ENST00000229330 OR2V1Q8NHB1 315 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 MRGPRFQ96AM1 343 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 RSG1Q9BU20 258 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 CRYM-AS1A6NIL9 109 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 GPX7Q96SL4 187 aaPredicted RBP12.09□□□□□ -0.47
HCFC2-201ENST00000229330 AMELYQ99218 206 aa12.09□□□□□ -0.47
HCFC2-201ENST00000229330 HELTA6NFD8 242 aa12.08□□□□□ -0.47
HCFC2-201ENST00000229330 BCL3P20749 454 aa12.08□□□□□ -0.47
HCFC2-201ENST00000229330 BARX1Q9HBU1 254 aaPredicted RBP12.08□□□□□ -0.47
HCFC2-201ENST00000229330 TECRQ9NZ01 308 aaKnown RBP12.08□□□□□ -0.47
HCFC2-201ENST00000229330 SH3BGRL2Q9UJC5 107 aa12.08□□□□□ -0.47
HCFC2-201ENST00000229330 PSG11Q9UQ72 335 aa12.08□□□□□ -0.47
HCFC2-201ENST00000229330 IFITM10A6NMD0 228 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 TRAT1Q6PIZ9 186 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 KISS1RQ969F8 398 aaPredicted RBP12.08□□□□□ -0.48
HCFC2-201ENST00000229330 SMIM8Q96KF7 97 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 CHST5Q9GZS9 411 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 HES4Q9HCC6 221 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 PLXNB2O15031 1838 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 HRKO00198 91 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 CXorf1O96002 111 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 SOD3P08294 240 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 ASAH2BP0C7U1 165 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 FAM87AP0C7U9 286 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 FZD5Q13467 585 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 TRIP12Q14669 1992 aaPredicted RBP12.08□□□□□ -0.48
HCFC2-201ENST00000229330 LILRA5A6NI73 299 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 LMO7DNF2Z398 122 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 KLRC4-KLRK1H3BQV0 150 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 CSN3P07498 182 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 EIF3IQ13347 325 aaKnown RBP12.08□□□□□ -0.48
HCFC2-201ENST00000229330 PMCHL1Q16048 86 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 OR4P4Q8NGL7 312 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 FER1L6-AS2Q96M78 137 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 SLX1AQ9BQ83 275 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 GAGE10A6NGK3 116 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 FCGR3AP08637 254 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 PNLIPP16233 465 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 PRSS12P56730 875 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 ROM1Q03395 351 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 PIGYQ3MUY2 71 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 SPATA46Q5T0L3 261 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 DHRS13Q6UX07 377 aa12.08□□□□□ -0.48
HCFC2-201ENST00000229330 RHBDL1O75783 438 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 MT-ND6P03923 174 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 CHRNB4P30926 498 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 DRD3P35462 400 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 RPL13AP40429 203 aaKnown RBP12.07□□□□□ -0.48
HCFC2-201ENST00000229330 GNB1P62873 340 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 PSG5Q15238 335 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 SPNS3Q6ZMD2 512 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 GMPPAQ96IJ6 420 aaPredicted RBP12.07□□□□□ -0.48
HCFC2-201ENST00000229330 MSGN1A6NI15 193 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 LIPT2A6NK58 231 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 LRRC30A6NM36 301 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 ZNF708P17019 499 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 SFTPA1Q8IWL2 248 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 OR1K1Q8NGR3 316 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 TWSG1Q9GZX9 223 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 FOXJ2Q9P0K8 574 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 FAM157CP0CG43 387 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 HIST1H1BP16401 226 aaKnown RBP12.07□□□□□ -0.48
HCFC2-201ENST00000229330 D2HGDHQ8N465 521 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 OR10X1Q8NGY0 326 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 ABHD14BQ96IU4 210 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 HSPB8Q9UJY1 196 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 WIPI2Q9Y4P8 454 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 NR2C2APQ86WQ0 139 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 OR2W1Q9Y3N9 320 aa12.07□□□□□ -0.48
HCFC2-201ENST00000229330 ADRA2AP08913 450 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 PSG2P11465 335 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 COL9A1P20849 921 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 UBE2L3P68036 154 aaKnown RBP12.06□□□□□ -0.48
HCFC2-201ENST00000229330 PLPPR2Q96GM1 343 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 WFIKKN1Q96NZ8 548 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 DEFB108AA8MXU0 73 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 HERPUD1Q15011 391 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 GABRA6Q16445 453 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 KMT5CQ86Y97 462 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 LURAP1LQ8IV03 231 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 ZNF355PQ9NSJ1 428 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 COL11A1P12107 1806 aaPredicted RBP12.06□□□□□ -0.48
HCFC2-201ENST00000229330 A0A1W2PP11 408 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 IL2RAP01589 272 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 ISG15P05161 165 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 MYF5P13349 255 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 MPLP40238 635 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 OR2D3Q8NGH3 330 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 REG4Q9BYZ8 158 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 CCDC88CQ9P219 2028 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 Q1RN00 199 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 LYRM7Q5U5X0 104 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 TMEM92Q6UXU6 159 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 C12orf54Q6X4T0 127 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 HSD17B10Q99714 261 aaKnown RBP12.06□□□□□ -0.48
HCFC2-201ENST00000229330 NDUFAF3Q9BU61 184 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 TMEM222Q9H0R3 208 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 DCAF16Q9NXF7 216 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 MAP1BP46821 2468 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms