RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Ifitm3Q9CQW9 137 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Utp23Q9CX11 249 aaKnown RBP9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gm12117V9GXK0 151 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Vmn1r61W4VSP5 300 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Scgb1b12A0A087WP21 93 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Emp3O35912 163 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Znf703P0CL69 594 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Fzd6Q61089 709 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 F830045P16RikQ8BJ95 487 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 DutQ8VCG1 200 aaKnown RBP9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr1490A0A1L1SVH0 321 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Prr23a1G3UW32 258 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Q3V0E1 1183 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ppp1r3eQ8BRJ4 279 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 MetrnlQ8VE43 311 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Thoc3Q8VE80 351 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Mrgprb5Q91ZB9 322 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Upk1aQ9D132 257 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr1158A2BHP7 313 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Lmx1bO88609 395 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Rhox4dQ2MDG0 205 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Rhox4eQ504P9 205 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Abhd16bQ80YU0 474 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Lrp12Q8BUJ9 858 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Rhox4bQ9JI43 205 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Cldn34dA2AGU5 210 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gm7714E9Q079 131 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Vmn1r20K7N778 303 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 P01735 133 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ly6dP35459 127 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gpr173Q6PI62 373 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr967Q7TRA6 310 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr266Q8VFC3 316 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr1457Q8VFK3 317 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 MeiobQ9D513 470 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 ManbalQ9D8X0 85 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Mettl9Q9EPL4 318 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Zbp1Q9QY24 411 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gm9857F7CXR1 130 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gm3512L7N206 146 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gcm2O09102 504 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Rab33bO35963 229 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Trp53rkaQ5U452 244 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr843Q7TRG4 313 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Tox3Q80W03 575 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Mic13Q8R404 119 aaKnown RBP9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr1324Q8VEU7 332 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Clec2dQ91V08 207 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Tp53rkQ99PW4 244 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Xcr1Q9R0M1 322 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Scn10aQ6QIY3 1958 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr1281Q7TQY6 305 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ikzf5Q8BU00 419 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Lancl3Q8CD19 420 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Uqcc3Q8K2T4 89 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Rnf113a1Q8R3P8 341 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Enpp5Q9EQG7 477 aa9.4□□□□□ -0.9
Scn8a-201ENSMUST00000082209 4930444P10RikD3YUR1 185 aa9.4□□□□□ -0.91
Scn8a-201ENSMUST00000082209 MpgQ04841 333 aaKnown RBP9.4□□□□□ -0.91
Scn8a-201ENSMUST00000082209 March9Q3TZ87 348 aa9.4□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr527Q7TRT9 305 aa9.4□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Shisa5Q9D7I0 235 aa9.4□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Atp4bP50992 294 aa9.4□□□□□ -0.91
Scn8a-201ENSMUST00000082209 LgalslQ8VED9 172 aa9.4□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Vps25Q9CQ80 176 aa9.4□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Adad2Q9D5P4 478 aa9.4□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Igkv6-29A0A0G2JEI6 115 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 FasP25446 327 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 AhrrQ3U1U7 701 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Prickle3Q80VL3 624 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Q9D7E4 109 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Exph5Q0VAV2 1960 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 A0A1L1STL9 112 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Phxr2P15972 65 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Pax2P32114 414 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Ablim3Q69ZX8 682 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 PimregQ8BFY7 231 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Vsig2Q9Z109 328 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Mn1D3YWE6 1297 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Esp3J3QN49 87 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Klre1Q8CJC7 226 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Ndfip1Q8R0W6 221 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 NubplQ9CWD8 319 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Adam11Q9R1V4 773 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Lsm2O35900 95 aaKnown RBP9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Gdf7P43029 461 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Rnase11Q5GAM9 192 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 4930474N05RikQ8BVR5 218 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Rpusd1Q8VCZ8 306 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Mllt1Q9ERL0 547 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Il36aQ9JLA2 160 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Tbx15O70306 602 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Znf8Q8BGV5 572 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Oraov1Q8CH62 137 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Dlk2Q8K1E3 382 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Ammecr1Q9JHT5 344 aaKnown RBP9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr785A0A0N4SVC3 312 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Vmn1r51Q8VIC6 319 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Slc25a37Q920G8 338 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Hspb9Q9DAM3 168 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms