RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 FasP25446 327 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Klk1b26P36369 261 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Tubg1P83887 451 aaKnown RBP8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Vmn1r15Q14C10 299 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Sec14l3Q5SQ27 401 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Tfap2eQ6VUP9 442 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Lrfn4Q80XU8 636 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Paqr7Q80ZE4 345 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Lcn10Q810Z1 182 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Tceal3Q8R0A5 200 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr1443Q8VFW8 312 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr50Q8VGK5 312 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Abhd3Q91ZH7 411 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 HaghQ99KB8 309 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Fdx2Q9CPW2 174 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Mmp16Q9WTR0 607 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Gm38303A0A0A6YWW8 100 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Gm12355A2A4X6 163 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ldlrad3A2AR95 345 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Vmn2r30K7N5W1 852 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Vmn2r47K7N709 852 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Vmn2r60L7N2A1 853 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 GbaP17439 515 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Srsf3P84104 164 aaKnown RBP8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr90Q0VEL5 310 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr328Q5NCD3 310 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 RalyQ64012 312 aaKnown RBP8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Zfp954Q7TNU5 416 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Lsm11Q8BUV6 361 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ucn3Q924A4 164 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ddah2Q99LD8 285 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ndufa9Q9DC69 377 aaKnown RBP8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Gpx2Q9JHC0 190 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Jag2Q9QYE5 1247 aa8.59□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 CrebbpP45481 2441 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Igkv1-135A0A0B4J1H7 120 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Igkv9-123A0A140T8N8 117 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr1335B2RVY8 335 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Kcns2O35174 477 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Efnb2P52800 336 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Cln6Q3U466 308 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Fbxo27Q6DIA9 280 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Lrrc75aQ7TSF4 339 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Slc25a28Q8R0Z5 364 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr187Q8VEX6 308 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Dnajb11Q99KV1 358 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr661Q99NH4 319 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Arrdc2Q9D668 407 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Gnpnat1Q9JK38 184 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Wif1Q9WUA1 379 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Col12a1Q60847 3120 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ube2dnl1A2AFH1 155 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 CymB7ZWD6 379 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr750E9Q0Z1 331 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 C1ql1O88992 258 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Atp4bP50992 294 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 LumP51885 338 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Hmga2P52927 108 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Nanos2P60322 136 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Npy1rQ04573 382 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr125Q14AJ9 320 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr453Q7TRV7 317 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Arl14epQ8BIX3 276 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Fbxw19Q8C2W8 466 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr1451Q8VFX5 310 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr1280Q8VGG8 305 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Tm4sf5Q91XF2 196 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Pdzd11Q9CZG9 140 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Fam210bQ9D8B6 190 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Prss22Q9ER10 306 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Smco4Q9JIS3 59 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Rcl1Q9JJT0 373 aaKnown RBP8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Tnfrsf19Q9JLL3 416 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Cacna1iE9Q7P2 2199 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr66F8VQ01 311 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Slc17a3G3UWD9 498 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Rnf148G3X9R7 316 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Gm5225J3QPL3 108 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr628K7N6B2 316 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Il7rP16872 459 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Rab2aP53994 212 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Kcng3P59053 433 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 PilrbQ2YFS2 224 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Eif4e1bQ3UTA9 244 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Q3UUX7 111 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Zdhhc8Q5Y5T5 762 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Grb2Q60631 217 aaKnown RBP8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Hspa12aQ8K0U4 675 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Tctn3Q8R2Q6 595 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Nt5mQ8VCE6 220 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr1100Q8VFM1 321 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Pla1aQ8VI78 456 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Lyzl6Q9DA11 148 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ccdc54Q9DAL3 329 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ap1s2Q9DB50 160 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Akip1Q9JJR5 212 aa8.58□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 AtrxQ61687 2476 aaKnown RBP8.57□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Prrt2E9PUL5 346 aa8.57□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 AipO08915 330 aa8.57□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Csf3P09920 208 aa8.57□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms