RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 FAM90A14PP0C7W9 464 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 FAM90A24PP0C7X0 464 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 GZMHP20718 246 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 PRRX1P54821 245 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 MED22Q15528 200 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 C17orf58Q2M2W7 97 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 LDLRAD2Q5SZI1 272 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 PRAMEF5Q5TYX0 476 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 DYNAPQ8N1N2 210 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 SUMF2Q8NBJ7 301 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 OR4C13Q8NGP0 309 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 NDNFQ8TB73 568 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 DPM3Q9P2X0 92 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 A0A1W2PPK0 400 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 HSPB6O14558 160 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 GEMIN2O14893 280 aaKnown RBP18.04■□□□□ 0.48
SF1-220ENST00000626028 RGS10O43665 173 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 SC5DO75845 299 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 MAS1P04201 325 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 CRHBPP24387 322 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 GABRA5P31644 462 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 TRAM1Q15629 374 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 FAM189A2Q15884 450 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 ACSM3Q53FZ2 586 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 IZUMO2Q6UXV1 221 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 PRSS48Q7RTY5 328 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 MUL1Q969V5 352 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 KIRREL1Q96J84 757 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 OR5M11Q96RB7 305 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 BLOC1S6Q9UL45 172 aa18.04■□□□□ 0.48
SF1-220ENST00000626028 LEUTXA8MZ59 168 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 OOSP1A8MZH6 123 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 NPIPB11E5RHQ5 1161 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 TOR1AO14656 332 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 TIMM23O14925 209 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 IL1AP01583 271 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 UBBP0CG47 229 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 PSMA1P25786 263 aaKnown RBP18.03■□□□□ 0.48
SF1-220ENST00000626028 GLP1RP43220 463 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 TPBGQ13641 420 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 RBM39Q14498 530 aaKnown RBP18.03■□□□□ 0.48
SF1-220ENST00000626028 LY6EQ16553 131 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 RBM48Q5RL73 367 aaKnown RBP18.03■□□□□ 0.48
SF1-220ENST00000626028 AWAT2Q6E213 333 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 BRICD5Q6PL45 260 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 GLIPR1L1Q6UWM5 242 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 OR9G1Q8NH87 305 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 UFD1Q92890 307 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 NKX3-1Q99801 234 aaPredicted RBP18.03■□□□□ 0.48
SF1-220ENST00000626028 TCF7L1Q9HCS4 588 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 CALYQ9NYX4 217 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 RCC2Q9P258 522 aaKnown RBP18.03■□□□□ 0.48
SF1-220ENST00000626028 RAB26Q9ULW5 256 aa18.03■□□□□ 0.48
SF1-220ENST00000626028 TMEM30CPA0ZSE6 113 aa18.02■□□□□ 0.48
SF1-220ENST00000626028 A6NDX4 124 aa18.02■□□□□ 0.48
SF1-220ENST00000626028 GLAP06280 429 aa18.02■□□□□ 0.48
SF1-220ENST00000626028 BRS3P32247 399 aa18.02■□□□□ 0.48
SF1-220ENST00000626028 HLA-DRB5Q30154 266 aa18.02■□□□□ 0.48
SF1-220ENST00000626028 CCDC144NLQ6NUI1 221 aa18.02■□□□□ 0.48
SF1-220ENST00000626028 OR13A1Q8NGR1 328 aa18.02■□□□□ 0.48
SF1-220ENST00000626028 OR2T6Q8NHC8 308 aa18.02■□□□□ 0.48
SF1-220ENST00000626028 PLPPR1Q8TBJ4 325 aa18.02■□□□□ 0.48
SF1-220ENST00000626028 HILPDAQ9Y5L2 63 aa18.02■□□□□ 0.48
SF1-220ENST00000626028 TRRAPQ9Y4A5 3859 aa18.02■□□□□ 0.47
SF1-220ENST00000626028 TET2Q6N021 2002 aaPredicted RBP18.01■□□□□ 0.47
SF1-220ENST00000626028 BUB1B-PAK6H3BSN5 160 aa18.01■□□□□ 0.47
SF1-220ENST00000626028 F2RL2O00254 374 aa18.01■□□□□ 0.47
SF1-220ENST00000626028 CA11O75493 328 aa18.01■□□□□ 0.47
SF1-220ENST00000626028 PAX6P26367 422 aa18.01■□□□□ 0.47
SF1-220ENST00000626028 MLLT11Q13015 90 aaPredicted RBP18.01■□□□□ 0.47
SF1-220ENST00000626028 C16orf82Q7Z2V1 217 aa18.01■□□□□ 0.47
SF1-220ENST00000626028 TMED9Q9BVK6 235 aa18.01■□□□□ 0.47
SF1-220ENST00000626028 CST11Q9H112 138 aa18.01■□□□□ 0.47
SF1-220ENST00000626028 ZNF286AQ9HBT8 521 aa18.01■□□□□ 0.47
SF1-220ENST00000626028 RAB9BQ9NP90 201 aa18.01■□□□□ 0.47
SF1-220ENST00000626028 ING3Q9NXR8 418 aa18.01■□□□□ 0.47
SF1-220ENST00000626028 IDI2-AS1Q9NZ38 188 aa18.01■□□□□ 0.47
SF1-220ENST00000626028 AMMECR1Q9Y4X0 333 aaPredicted RBP18.01■□□□□ 0.47
SF1-220ENST00000626028 WNK1Q9H4A3 2382 aa18■□□□□ 0.47
SF1-220ENST00000626028 MCRIP1C9JLW8 97 aa18■□□□□ 0.47
SF1-220ENST00000626028 ORC5O43913 435 aa18■□□□□ 0.47
SF1-220ENST00000626028 CHST1O43916 411 aa18■□□□□ 0.47
SF1-220ENST00000626028 UCHL1P09936 223 aa18■□□□□ 0.47
SF1-220ENST00000626028 CD37P11049 281 aa18■□□□□ 0.47
SF1-220ENST00000626028 ATAD3CQ5T2N8 411 aa18■□□□□ 0.47
SF1-220ENST00000626028 GLT8D1Q68CQ7 371 aa18■□□□□ 0.47
SF1-220ENST00000626028 Q8N2B8 174 aa18■□□□□ 0.47
SF1-220ENST00000626028 SGCDQ92629 289 aa18■□□□□ 0.47
SF1-220ENST00000626028 LY6LH3BQJ8 138 aa17.99■□□□□ 0.47
SF1-220ENST00000626028 ATP6V1G2O95670 118 aa17.99■□□□□ 0.47
SF1-220ENST00000626028 MGMTP16455 207 aa17.99■□□□□ 0.47
SF1-220ENST00000626028 CPEP16870 476 aa17.99■□□□□ 0.47
SF1-220ENST00000626028 SRMP19623 302 aa17.99■□□□□ 0.47
SF1-220ENST00000626028 GDNFP39905 211 aa17.99■□□□□ 0.47
SF1-220ENST00000626028 RANBP1P43487 201 aa17.99■□□□□ 0.47
SF1-220ENST00000626028 RAB13P51153 203 aa17.99■□□□□ 0.47
SF1-220ENST00000626028 EFNB2P52799 333 aa17.99■□□□□ 0.47
SF1-220ENST00000626028 TMEM30BQ3MIR4 351 aa17.99■□□□□ 0.47
SF1-220ENST00000626028 HSD17B12Q53GQ0 312 aa17.99■□□□□ 0.47
SF1-220ENST00000626028 C1orf100Q5SVJ3 147 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms