RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 ZNF727A8MUV8 499 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 PPP5D1E7EU14 171 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 NPIPA5E9PKD4 350 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 K7EP13 123 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 GFRA1P56159 465 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 NKAIN3Q8N8D7 197 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 OR1P1Q8NH06 330 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 PTX4Q96A99 478 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 SNX22Q96L94 193 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 DIRC2Q96SL1 478 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 NPIPA1Q9UND3 350 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 MEMO1Q9Y316 297 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 YLPM1P49750 1951 aaKnown RBP11.33□□□□□ -0.6
FOXN3-219ENST00000615335 FTCDNL1E5RQL4 147 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 MS4A18H0YCH9 400 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 LMX1BO60663 402 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 CSN2P05814 226 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 FMODQ06828 376 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 MS4A18Q3C1V0 323 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 BTNL3Q6UXE8 466 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.33□□□□□ -0.6
FOXN3-219ENST00000615335 OR4D6Q8NGJ1 314 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 ASB10Q8WXI3 467 aa11.33□□□□□ -0.6
FOXN3-219ENST00000615335 ZNF2Q9BSG1 426 aaPredicted RBP11.33□□□□□ -0.6
FOXN3-219ENST00000615335 TLN1Q9Y490 2541 aaKnown RBP11.32□□□□□ -0.6
FOXN3-219ENST00000615335 P2RY10O00398 339 aa11.32□□□□□ -0.6
FOXN3-219ENST00000615335 CA11O75493 328 aa11.32□□□□□ -0.6
FOXN3-219ENST00000615335 IL6RP08887 468 aaPredicted RBP11.32□□□□□ -0.6
FOXN3-219ENST00000615335 H2BFMP0C1H6 154 aa11.32□□□□□ -0.6
FOXN3-219ENST00000615335 OR5H8P0DN80 308 aa11.32□□□□□ -0.6
FOXN3-219ENST00000615335 LMO1P25800 156 aa11.32□□□□□ -0.6
FOXN3-219ENST00000615335 BRS3P32247 399 aa11.32□□□□□ -0.6
FOXN3-219ENST00000615335 DAP3P51398 398 aaKnown RBP11.32□□□□□ -0.6
FOXN3-219ENST00000615335 ZP4Q12836 540 aa11.32□□□□□ -0.6
FOXN3-219ENST00000615335 SLC25A26Q70HW3 274 aa11.32□□□□□ -0.6
FOXN3-219ENST00000615335 RNASE8Q8TDE3 154 aaKnown RBP11.32□□□□□ -0.6
FOXN3-219ENST00000615335 FAAP24Q9BTP7 215 aa11.32□□□□□ -0.6
FOXN3-219ENST00000615335 CENPMQ9NSP4 180 aa11.32□□□□□ -0.6
FOXN3-219ENST00000615335 RAB22AQ9UL26 194 aa11.32□□□□□ -0.6
FOXN3-219ENST00000615335 SVILO95425 2214 aa11.32□□□□□ -0.6
FOXN3-219ENST00000615335 LIPT2A6NK58 231 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 TNFSF11O14788 317 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 AKR1C4P17516 323 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 PCK2Q16822 640 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 OR4S1Q8NGB4 309 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 TVP23CQ96ET8 276 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 C2orf50Q96LR7 162 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 TAAR6Q96RI8 345 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 ARV1Q9H2C2 271 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 ZDHHC11Q9H8X9 412 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 DNAJC4Q9NNZ3 241 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 TMEM242Q9NWH2 141 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 LIPGQ9Y5X9 500 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 URGCP-MRPS24S4R325 110 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 PKD1L2Q7Z442 2459 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 RPL29P47914 159 aaKnown RBP11.31□□□□□ -0.6
FOXN3-219ENST00000615335 COL5A1-AS1Q5SY13 56 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 TEX38Q6PEX7 206 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 H1FNTQ75WM6 255 aaPredicted RBP11.31□□□□□ -0.6
FOXN3-219ENST00000615335 LYPD6Q86Y78 171 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 AQP3Q92482 292 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 FAM46BQ96A09 425 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 TMEM18Q96B42 140 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 FGGYQ96C11 551 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 CNTD2Q9H8S5 307 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 ALKBH4Q9NXW9 302 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 RHBDD3Q9Y3P4 386 aa11.31□□□□□ -0.6
FOXN3-219ENST00000615335 TRGV5A0A0B4J1U4 118 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 A0A0J9YW62 118 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 C20orf202A1L168 122 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 GSTP1P09211 210 aaKnown RBP11.3□□□□□ -0.6
FOXN3-219ENST00000615335 OR4A8P0C604 315 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 PGA4P0DJD7 388 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 PGA5P0DJD9 388 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 KLF3P57682 345 aaPredicted RBP11.3□□□□□ -0.6
FOXN3-219ENST00000615335 SELENOTP62341 195 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 SRYQ05066 204 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 ZNF260Q3ZCT1 412 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 P4HA3Q7Z4N8 544 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 SLC35E3Q7Z769 313 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 TRAPPC6BQ86SZ2 158 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 CHST4Q8NCG5 386 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 KCNK17Q96T54 332 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 IGKV1D-43A0A0B4J1Z2 117 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 DHRS7CA6NNS2 312 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 POU3F1Q03052 451 aaPredicted RBP11.3□□□□□ -0.6
FOXN3-219ENST00000615335 OR5I1Q13606 314 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 TMEM128Q5BJH2 165 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 GGNQ86UU5 652 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 WDFY1Q8IWB7 410 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 GCNT2Q8N0V5 402 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 RNF133Q8WVZ7 376 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 PRORYQ9H606 182 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 CDH20Q9HBT6 801 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 MSL2Q9HCI7 577 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 MED29Q9NX70 200 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 TUBD1Q9UJT1 453 aa11.3□□□□□ -0.6
FOXN3-219ENST00000615335 BORCS7-ASMTA0A0B4J1R7 106 aa11.29□□□□□ -0.6
FOXN3-219ENST00000615335 PPBPP02775 128 aa11.29□□□□□ -0.6
FOXN3-219ENST00000615335 PGA3P0DJD8 388 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms