RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 A0A1W2PPE3 182 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 A0A1W2PPI3 338 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 TMEM212A6NML5 194 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 SERPINE3A8MV23 424 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 NPIPB11E5RHQ5 1161 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 GABRPO00591 440 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 DYNC1I1O14576 645 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 IL1AP01583 271 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 RPSAP08865 295 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 GABRB1P18505 474 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 RAB3AP20336 220 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 GNG10P50151 68 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 RAB7AP51149 207 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 IL13RA2Q14627 380 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 RSBN1Q5VWQ0 802 aaPredicted RBP10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 TNFAIP8L1Q8WVP5 186 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 TSEN15Q8WW01 171 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 DPF1Q92782 380 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 GPR61Q9BZJ8 451 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 ZFP57Q9NU63 452 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 ERVK13-1Q9NX77 482 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 GMPPBQ9Y5P6 360 aa10.58□□□□□ -0.72
POLR2J3-219ENST00000608621 NUDT19A8MXV4 375 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 MAGEB3O15480 346 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 FGF16O43320 207 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 HTR3BO95264 441 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 FADS2O95864 444 aaKnown RBP10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 IGKV1D-33P01593 117 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 IGKV1-33P01594 117 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 IGHG2P01859 326 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 CCDC159P0C7I6 412 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 MYCNOSP40205 109 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 SOX2P48431 317 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 ALDH3A2P51648 485 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 GBX2P52951 348 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 RSU1Q15404 277 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 PIGYQ3MUY2 71 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 ASCL4Q6XD76 172 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 SLC16A12Q6ZSM3 486 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 C8orf86Q6ZUL3 223 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 OR2W3Q7Z3T1 314 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 SLC35E3Q7Z769 313 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 OR8H3Q8N146 312 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 Q8NFD4 153 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 OR10A7Q8NGE5 316 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 OR51A2Q8NGJ7 313 aa10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 MCRIP2Q9BUT9 160 aaKnown RBP10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.57□□□□□ -0.72
POLR2J3-219ENST00000608621 LINC01548A6NM66 108 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 SSTR5P35346 364 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 KCNJ3P48549 501 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 GTF2A1P52655 376 aaPredicted RBP10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 SLC35B1P78383 322 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 PAX5Q02548 391 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 CD69Q07108 199 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 MRPL28Q13084 256 aaKnown RBP10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 EBI3Q14213 229 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 ZNF529Q6P280 563 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 MOB3BQ86TA1 216 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 SUMF2Q8NBJ7 301 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 OR10X1Q8NGY0 326 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 RHOXF1Q8NHV9 184 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 CPNE2Q96FN4 548 aaPredicted RBP10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 FAM192AQ9GZU8 254 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 FAM118AQ9NWS6 357 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 ZNF581Q9P0T4 197 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 ING4Q9UNL4 249 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 DNAH9Q9NYC9 4486 aa10.56□□□□□ -0.72
POLR2J3-219ENST00000608621 IGHV3-72A0A0B4J1Y9 119 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 IGHV1-3A0A0C4DH29 117 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 H3BNX3 289 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 CDRT1O95170 752 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 GAPDHP04406 335 aaKnown RBP10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 VSIG8P0DPA2 414 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 GZMHP20718 246 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 REG1BP48304 166 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 ZNF816Q0VGE8 651 aaPredicted RBP10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 UNQ9370/PRO34162Q6UXP9 181 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 FOXRED2Q8IWF2 684 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 STPG2Q8N412 459 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 CBR4Q8N4T8 237 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 COMMD1Q8N668 190 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 KLHL30-AS1Q8NEE0 82 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 OR52I1Q8NGK6 324 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 RGP1Q92546 391 aaPredicted RBP10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 EAF1Q96JC9 268 aaPredicted RBP10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 Q96MT0 163 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 DUX3Q96PT4 197 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 P2RX4Q99571 388 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 B9D2Q9BPU9 175 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 DPCDQ9BVM2 203 aaPredicted RBP10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 JAM3Q9BX67 310 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 TAS2R4Q9NYW5 299 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 ST3GAL6Q9Y274 331 aa10.55□□□□□ -0.72
POLR2J3-219ENST00000608621 NCBP2LA6PVI3 153 aaKnown RBP10.54□□□□□ -0.72
POLR2J3-219ENST00000608621 CCRL2O00421 344 aa10.54□□□□□ -0.72
POLR2J3-219ENST00000608621 HSD17B6O14756 317 aa10.54□□□□□ -0.72
POLR2J3-219ENST00000608621 MPZL2O60487 215 aa10.54□□□□□ -0.72
POLR2J3-219ENST00000608621 SLC6A1P30531 599 aa10.54□□□□□ -0.72
POLR2J3-219ENST00000608621 RAB40BQ12829 278 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms