RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 SLC16A12Q6ZSM3 486 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 C16orf82Q7Z2V1 217 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 DYNAPQ8N1N2 210 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 SUMF2Q8NBJ7 301 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 PHYHIPQ92561 330 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 AKR1E2Q96JD6 320 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 LINC00574Q9H8X3 128 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 TCF7L1Q9HCS4 588 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 RAB9BQ9NP90 201 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 ING3Q9NXR8 418 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 CALYQ9NYX4 217 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 GHRLQ9UBU3 117 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 HILPDAQ9Y5L2 63 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 TRRAPQ9Y4A5 3859 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 A6NDX4 124 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 FAM90A10PA6NDY2 464 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 FAM90A18PA6NE21 464 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 FAM90A16PA6NEW6 464 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 ERICH4A6NGS2 130 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 FAM90A20PA6NIJ5 464 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 FAM90A7PA6NKC0 464 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 FAM90A22PA8MWA6 464 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 FAM90A12PA8MX19 464 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 FAM90A5PA8MXJ8 464 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 FAM90A23PA8MXZ1 464 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 MMP23AO75900 390 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 FAM90A15PP0C7V4 464 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 FAM90A13PP0C7W8 464 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 FAM90A14PP0C7W9 464 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 FAM90A24PP0C7X0 464 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 C17orf58Q2M2W7 97 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 HLA-DRB5Q30154 266 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 TREML4Q6UXN2 200 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 OR9G1Q8NH87 305 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 NEK7Q8TDX7 302 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 MUL1Q969V5 352 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 ORAI1Q96D31 301 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 KIRREL1Q96J84 757 aa14.31□□□□□ -0.12
SHKBP1-204ENST00000594862 MAGEA13PA6NCF6 341 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 GEMIN2O14893 280 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 RGS10O43665 173 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 CHST1O43916 411 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 MAS1P04201 325 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 UBBP0CG47 229 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 CGB3P0DN86 165 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 CGB7P0DN87 165 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 GZMHP20718 246 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 PAX6P26367 422 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 MNDAP41218 407 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 EFNB2P52799 333 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 MED22Q15528 200 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 LDLRAD2Q5SZI1 272 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 ATAD3CQ5T2N8 411 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 GLIPR1L1Q6UWM5 242 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 OR13A1Q8NGR1 328 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 UFD1Q92890 307 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 CST11Q9H112 138 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 DUSP21Q9H596 190 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 ZNF286AQ9HBT8 521 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 IDI2-AS1Q9NZ38 188 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 BLOC1S6Q9UL45 172 aa14.3□□□□□ -0.12
SHKBP1-204ENST00000594862 A0A1W2PPK0 400 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 NPIPB11E5RHQ5 1161 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 CA11O75493 328 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 NFYBP25208 207 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 PSMA1P25786 263 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 IRF3Q14653 427 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 TRAM1Q15629 374 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 TMEM30BQ3MIR4 351 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 ACSM3Q53FZ2 586 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 IZUMO2Q6UXV1 221 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 Q6ZTK2 550 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 PLPPR1Q8TBJ4 325 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 CAPSLQ8WWF8 208 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 NKX3-1Q99801 234 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 PRSS22Q9GZN4 317 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 MMP28Q9H239 520 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 ISYNA1Q9NPH2 558 aa14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 RCC2Q9P258 522 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 LSM2Q9Y333 95 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-204ENST00000594862 MCRIP1C9JLW8 97 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 BUB1B-PAK6H3BSN5 160 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 PIN1P1O15428 100 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 GLAP06280 429 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 RANBP1P43487 201 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 HERPUD1Q15011 391 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 C2orf68Q2NKX9 166 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 TPTE2P1Q5T6R2 138 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 GLT8D1Q68CQ7 371 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 UNQ9370/PRO34162Q6UXP9 181 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 Q8N2B8 174 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 MRGPRDQ8TDS7 321 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 MMP27Q9H306 513 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 LIN7BQ9HAP6 207 aa14.28□□□□□ -0.12
SHKBP1-204ENST00000594862 ORC5O43913 435 aa14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 MGMTP16455 207 aa14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 GDNFP39905 211 aa14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 RAB13P51153 203 aa14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 SRSF4Q08170 494 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-204ENST00000594862 HSD17B12Q53GQ0 312 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms