RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 ZNF626Q68DY1 528 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 LHFPL2Q6ZUX7 228 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 CEACAM19Q7Z692 300 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 TRAPPC6BQ86SZ2 158 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 C1QL4Q86Z23 238 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 DYNAPQ8N1N2 210 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 ZNF676Q8N7Q3 588 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 TPRX1Q8N7U7 411 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 ZFP41Q8N8Y5 198 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 OR11H6Q8NGC7 330 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 CMTM3Q96MX0 182 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 ZCCHC4Q9H5U6 513 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 RBFOX1Q9NWB1 397 aaKnown RBP13.06□□□□□ -0.32
CIRBP-241ENST00000593048 FRRS1LQ9P0K9 344 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 RABL2AQ9UBK7 228 aaPredicted RBP13.06□□□□□ -0.32
CIRBP-241ENST00000593048 ADAM30Q9UKF2 790 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 RABL2BQ9UNT1 228 aa13.06□□□□□ -0.32
CIRBP-241ENST00000593048 A0A0G2JK05 382 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 ODF3BA8MYP8 253 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 H3BUI4 141 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 PEX14O75381 377 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 ISG15P05161 165 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 Q499Y3 187 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 ARSJQ5FYB0 599 aaPredicted RBP13.05□□□□□ -0.32
CIRBP-241ENST00000593048 DDI2Q5TDH0 399 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 UTS2BQ765I0 119 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 OR52N4Q8NGI2 321 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 OR13C3Q8NGS6 347 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 GPR148Q8TDV2 347 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 RFT1Q96AA3 541 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 C6orf62Q9GZU0 229 aaPredicted RBP13.05□□□□□ -0.32
CIRBP-241ENST00000593048 IL36RNQ9UBH0 155 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 HHLA2Q9UM44 414 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 TCF19Q9Y242 345 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 HILPDAQ9Y5L2 63 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 LINC00312Q9Y6C7 94 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 SESN1Q9Y6P5 492 aa13.05□□□□□ -0.32
CIRBP-241ENST00000593048 IGKV1-9A0A0C4DH69 117 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 TRBV5-5A0A0J9YX44 114 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 OR4C45A6NMZ5 311 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 SIRPB1O00241 398 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 SH2D1BO14796 132 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 MGST3O14880 152 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 PSPNO60542 156 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 SCAND1P57086 179 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 PPP3R1P63098 170 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 PDZK1IP1Q13113 114 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 SPIN3Q5JUX0 258 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 HIST2H2BDQ6DRA6 164 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 TMEM219Q86XT9 240 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 SPSB1Q96BD6 273 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 RNF167Q9H6Y7 350 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 SEBOXQ9HB31 216 aaPredicted RBP13.04□□□□□ -0.32
CIRBP-241ENST00000593048 NEK6Q9HC98 313 aa13.04□□□□□ -0.32
CIRBP-241ENST00000593048 FUOMA2VDF0 154 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 A6NDX4 124 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 F2RL2O00254 374 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 ZFPL1O95159 310 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 CALRP27797 417 aaKnown RBP13.03□□□□□ -0.32
CIRBP-241ENST00000593048 TGFBR1P36897 503 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 NANOS3P60323 173 aaKnown RBP13.03□□□□□ -0.32
CIRBP-241ENST00000593048 RPS11P62280 158 aaKnown RBP eCLIP13.03□□□□□ -0.32
CIRBP-241ENST00000593048 HABP2Q14520 560 aaPredicted RBP13.03□□□□□ -0.32
CIRBP-241ENST00000593048 ZNF146Q15072 292 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 HSD17B12Q53GQ0 312 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 MINOS1Q5TGZ0 78 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 CCBE1Q6UXH8 406 aaPredicted RBP13.03□□□□□ -0.32
CIRBP-241ENST00000593048 TCF23Q7RTU1 214 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 CCDC190Q86UF4 302 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 OR4S1Q8NGB4 309 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 RNF166Q96A37 237 aaPredicted RBP13.03□□□□□ -0.32
CIRBP-241ENST00000593048 CLEC7AQ9BXN2 247 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 PRSS22Q9GZN4 317 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 TMEM133Q9H2Q1 129 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 ABRACLQ9P1F3 81 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 MINOS1-NBL1R4GNA1 71 aa13.03□□□□□ -0.32
CIRBP-241ENST00000593048 TET2Q6N021 2002 aaPredicted RBP13.02□□□□□ -0.33
CIRBP-241ENST00000593048 IGHV2-26A0A0B4J1V2 119 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 NOTOA8MTQ0 251 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 FBXO24O75426 580 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 CD2P06729 351 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 RAB3BP20337 219 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 ERP29P30040 261 aaKnown RBP13.02□□□□□ -0.33
CIRBP-241ENST00000593048 SCN1BQ07699 218 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 NSUN5P1Q3KNT7 163 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 LDLRAD2Q5SZI1 272 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 MFSD4AQ8N468 514 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 MINDY2Q8NBR6 621 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 OR5D18Q8NGL1 313 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 OR13C9Q8NGT0 318 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 CFHR4Q92496 578 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 SPACA5Q96QH8 159 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 CCDC32Q9BV29 185 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 BARHL1Q9BZE3 327 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 GAL3ST2Q9H3Q3 398 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 ZNF702PQ9H963 129 aa13.02□□□□□ -0.33
CIRBP-241ENST00000593048 UBE2J1Q9Y385 318 aaPredicted RBP13.02□□□□□ -0.33
CIRBP-241ENST00000593048 TRGV10A0A0A0MS01 117 aa13.01□□□□□ -0.33
CIRBP-241ENST00000593048 TPPPO94811 219 aa13.01□□□□□ -0.33
CIRBP-241ENST00000593048 OR2H2O95918 312 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms