RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 PIN1P1O15428 100 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 HOXA3O43365 443 aaPredicted RBP8.48□□□□□ -1.05
SDF2-208ENST00000589788 OR2H2O95918 312 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 PAHP00439 452 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 CCL3L1P16619 93 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 IGFBP3P17936 291 aaPredicted RBP8.48□□□□□ -1.05
SDF2-208ENST00000589788 CALRP27797 417 aaKnown RBP8.48□□□□□ -1.05
SDF2-208ENST00000589788 PTGFRP43088 359 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 OR3A4PP47883 348 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 UBE2E1P51965 193 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 ERVFRD-1P60508 538 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 VBP1P61758 197 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 MEF2CQ06413 473 aaPredicted RBP8.48□□□□□ -1.05
SDF2-208ENST00000589788 ZNF273Q14593 569 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 SLC9A3R2Q15599 337 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 HSD17B12Q53GQ0 312 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 FAM27D1Q5T7N8 215 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 Q6YL49 198 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 CHST4Q8NCG5 386 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 OR4S1Q8NGB4 309 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 OR10K1Q8NGX5 313 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 C1orf147Q96MC9 270 aaPredicted RBP8.48□□□□□ -1.05
SDF2-208ENST00000589788 METTL9Q9H1A3 318 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 PPIL3Q9H2H8 161 aaKnown RBP8.48□□□□□ -1.05
SDF2-208ENST00000589788 RNF167Q9H6Y7 350 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 TNFRSF19Q9NS68 423 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 ING4Q9UNL4 249 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 FOXJ3Q9UPW0 622 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 DSCAML1Q8TD84 2053 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 TRAV8-7A0A075B6U6 113 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 TRAV1-2A0A0B4J238 106 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 MEX3AA1L020 520 aaKnown RBP8.47□□□□□ -1.05
SDF2-208ENST00000589788 MEIOCA2RUB1 952 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 FUOMA2VDF0 154 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 CDRT1O95170 752 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 CSTBP04080 98 aaKnown RBP8.47□□□□□ -1.05
SDF2-208ENST00000589788 MAS1P04201 325 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 FBP1P09467 338 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 ZNF728P0DKX0 622 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 MYL9P24844 172 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 SAA4P35542 130 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 TGFBR1P36897 503 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 OR3A1P47881 315 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 SPCS2Q15005 226 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 ELP2Q6IA86 826 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 C12orf54Q6X4T0 127 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 TRAPPC6BQ86SZ2 158 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 PNKDQ8N490 385 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 JAGN1Q8N5M9 183 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 TPRX1Q8N7U7 411 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 NDNFQ8TB73 568 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 SSMEM1Q8WWF3 244 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 TNFRSF14Q92956 283 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 ZNF714Q96N38 554 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 NKX3-1Q99801 234 aaPredicted RBP8.47□□□□□ -1.05
SDF2-208ENST00000589788 PPA2Q9H2U2 334 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 PRDM13Q9H4Q3 707 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 PCDHB16Q9NRJ7 776 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 LINC00312Q9Y6C7 94 aa8.47□□□□□ -1.05
SDF2-208ENST00000589788 A0A0G2JK05 382 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 C17orf98A8MV24 154 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 IL1AP01583 271 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 RBP4P02753 201 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 MELTFP08582 738 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 SRMP19623 302 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 SERPINA2P20848 420 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 COX7A1P24310 79 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 LMO1P25800 156 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 ERP29P30040 261 aaKnown RBP8.46□□□□□ -1.06
SDF2-208ENST00000589788 SERPINB10P48595 397 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 P2RX3P56373 397 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 LGALS4P56470 323 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 IL13RA2Q14627 380 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 MIDNQ504T8 468 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 STEAP3Q658P3 488 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 Q6P435 159 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 ASCL4Q6XD76 172 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 ZNF782Q6ZMW2 699 aaPredicted RBP8.46□□□□□ -1.06
SDF2-208ENST00000589788 TPRA1Q86W33 373 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 TMEM86BQ8N661 226 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 SLITRK2Q9H156 845 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 DCSTAMPQ9H295 470 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 DPAGT1Q9H3H5 408 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 TCF7L1Q9HCS4 588 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 ING3Q9NXR8 418 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 IL36GQ9NZH8 169 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 POMT1Q9Y6A1 747 aa8.46□□□□□ -1.06
SDF2-208ENST00000589788 STAB1Q9NY15 2570 aa8.45□□□□□ -1.06
SDF2-208ENST00000589788 TRGV10A0A0A0MS01 117 aa8.45□□□□□ -1.06
SDF2-208ENST00000589788 TMEM89A2RUT3 159 aa8.45□□□□□ -1.06
SDF2-208ENST00000589788 BTBD17A6NE02 478 aa8.45□□□□□ -1.06
SDF2-208ENST00000589788 SLC33A1O00400 549 aaPredicted RBP8.45□□□□□ -1.06
SDF2-208ENST00000589788 HSPB6O14558 160 aa8.45□□□□□ -1.06
SDF2-208ENST00000589788 ZNF780AO75290 641 aaPredicted RBP8.45□□□□□ -1.06
SDF2-208ENST00000589788 CRYBA1P05813 215 aa8.45□□□□□ -1.06
SDF2-208ENST00000589788 SDC2P34741 201 aa8.45□□□□□ -1.06
SDF2-208ENST00000589788 GLIPR1P48060 266 aa8.45□□□□□ -1.06
SDF2-208ENST00000589788 DLX6P56179 175 aa8.45□□□□□ -1.06
SDF2-208ENST00000589788 AESQ08117 197 aa8.45□□□□□ -1.06
SDF2-208ENST00000589788 GPR176Q14439 515 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms