RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PSG6Q00889 435 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 OR1C1Q15619 314 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 MTURNQ8N3F0 131 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 TMEM265A0A087WTH1 108 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 ZNF124Q15973 351 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 ZNF718Q3SXZ3 478 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 ZNF774Q6NX45 483 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 SLC36A1Q7Z2H8 476 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 RFLNBQ8N5W9 214 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 ARL6IP6Q8N6S5 226 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 VSTM2LQ96N03 204 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 RBM14Q96PK6 669 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 MOSPD3O75425 235 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 HAND1O96004 215 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 PLP1P60201 277 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 RIGQ13278 110 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 ELSPBP1Q96BH3 223 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 COX14Q96I36 57 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 PSG5Q15238 335 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 C1orf100Q5SVJ3 147 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 OR4F17Q8NGA8 305 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 SMIM12Q96EX1 92 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 ADAT3Q96EY9 351 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 OR2V2Q96R30 315 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 IGHV3-64DA0A0J9YX35 117 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 IGSF23A1L1A6 192 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 OR5B21A6NL26 309 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 RAB29O14966 203 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 DCAF16Q9NXF7 216 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 KLHDC2Q9Y2U9 406 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 TRGV10A0A0A0MS01 117 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 CRYAAP02489 173 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 FAM157BP0CG42 384 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 HES1Q14469 280 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 OR4P4Q8NGL7 312 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 PSG11Q9UQ72 335 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 FAM157CP0CG43 387 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 HIST1H1EP10412 219 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 RUNX1Q01196 453 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 PRSS41Q7RTY9 318 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 ZBTB34Q8NCN2 500 aa12.84□□□□□ -0.35
SMARCA4-214ENST00000589677 CACNA1CQ13936 2221 aa12.83□□□□□ -0.35
SMARCA4-214ENST00000589677 BGLAPP02818 100 aa12.83□□□□□ -0.35
SMARCA4-214ENST00000589677 PRSS1P07477 247 aa12.83□□□□□ -0.35
SMARCA4-214ENST00000589677 HOXB3P14651 431 aaPredicted RBP12.83□□□□□ -0.35
SMARCA4-214ENST00000589677 ZNF32P17041 273 aa12.83□□□□□ -0.35
SMARCA4-214ENST00000589677 VMA21Q3ZAQ7 101 aa12.83□□□□□ -0.35
SMARCA4-214ENST00000589677 HIKESHIQ53FT3 197 aa12.83□□□□□ -0.35
SMARCA4-214ENST00000589677 OR2T6Q8NHC8 308 aa12.83□□□□□ -0.35
SMARCA4-214ENST00000589677 C8orf44Q96CB5 159 aa12.83□□□□□ -0.35
SMARCA4-214ENST00000589677 RARRES2Q99969 163 aa12.83□□□□□ -0.35
SMARCA4-214ENST00000589677 OR6C3Q9NZP0 311 aa12.83□□□□□ -0.35
SMARCA4-214ENST00000589677 CDC42EP3Q9UKI2 254 aa12.83□□□□□ -0.35
SMARCA4-214ENST00000589677 ZFP30Q9Y2G7 519 aa12.83□□□□□ -0.35
SMARCA4-214ENST00000589677 PMS2P1A4D2B8 440 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 LINC01387J3KSC0 135 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 FZD5Q13467 585 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 GABRA6Q16445 453 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 LINC00696Q6ZRV3 163 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 MENTQ9BUN1 341 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 OR2W1Q9Y3N9 320 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 SCN9AQ15858 1988 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 CSN3P07498 182 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 TMEM230Q96A57 120 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 NUDT16L1Q9BRJ7 211 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 PAPPA2Q9BXP8 1791 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 PIN1P1O15428 100 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 P01737 135 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 FABP2P12104 132 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 GALNSP34059 522 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 CHST5Q9GZS9 411 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 PIPOXQ9P0Z9 390 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 CES1P1Q9UKY3 287 aa12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 MRPS2Q9Y399 296 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-214ENST00000589677 SHISA8B8ZZ34 492 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 PPP1CCP36873 323 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 PDPNQ86YL7 162 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 OR8G5Q8NG78 346 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 COL5A3P25940 1745 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 GFERP55789 205 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 UBALD1Q8TB05 177 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 HSD17B10Q99714 261 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 GNB4Q9HAV0 340 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 SH3BGRL2Q9UJC5 107 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 OPRK1P41145 380 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 ZXDAP98168 799 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 FNDC7Q5VTL7 733 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 CYB5R2Q6BCY4 276 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 UBE2CO00762 179 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 CA2P00918 260 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 HLA-DQA1P01909 254 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 METAP1P53582 386 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 LGALS4P56470 323 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 SPINK9Q5DT21 86 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 OR1L3Q8NH93 324 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 ZPLD1Q8TCW7 415 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 R3HDM4Q96D70 268 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 MPC1Q9Y5U8 109 aa12.82□□□□□ -0.36
SMARCA4-214ENST00000589677 DOCK1Q14185 1865 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms