RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 ATP1B3P54709 279 aa10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 PPP1R8Q12972 351 aaKnown RBP10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 SLC35D3Q5M8T2 416 aa10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 SLC16A12Q6ZSM3 486 aa10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 CPOQ8IVL8 374 aa10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 TMEM104Q8NE00 496 aa10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 BBS1Q8NFJ9 593 aa10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 OR13A1Q8NGR1 328 aa10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 RFESDQ8TAC1 157 aa10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 ASB17Q8WXJ9 295 aa10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 FLYWCH2Q96CP2 140 aaKnown RBP10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 DGCR6LQ9BY27 220 aa10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 PARP11Q9NR21 331 aa10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 R4GMQ9 66 aa10.78□□□□□ -0.68
PPP4R1-206ENST00000577779 DNAH6Q9C0G6 4158 aa10.77□□□□□ -0.68
PPP4R1-206ENST00000577779 MEIKINA0A087WXM9 373 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 ZNF736B4DX44 427 aaPredicted RBP10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 H0Y980 276 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 SLC33A1O00400 549 aaPredicted RBP10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 ATP6V0E1O15342 81 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 SERPINA3P01011 423 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 HTR1FP30939 366 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 RBP2P50120 134 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 PSME3P61289 254 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 ODF4Q2M2E3 257 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 HACD2Q6Y1H2 254 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 PLEKHG7Q6ZR37 379 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 CHST4Q8NCG5 386 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 RTN4IP1Q8WWV3 396 aaPredicted RBP10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 ATP6V1G3Q96LB4 118 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 CHST5Q9GZS9 411 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 COMMD4Q9H0A8 199 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 ZCCHC4Q9H5U6 513 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 LINC00574Q9H8X3 128 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 MRM2Q9UI43 246 aaKnown RBP10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 KIF25Q9UIL4 384 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 TMEM14AQ9Y6G1 99 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 FAT2Q9NYQ8 4349 aa10.77□□□□□ -0.69
PPP4R1-206ENST00000577779 HSPB1P04792 205 aaKnown RBP10.76□□□□□ -0.69
PPP4R1-206ENST00000577779 CCL1P22362 96 aa10.76□□□□□ -0.69
PPP4R1-206ENST00000577779 MTCP1P56278 107 aa10.76□□□□□ -0.69
PPP4R1-206ENST00000577779 LINC00322Q6ZN03 302 aaPredicted RBP10.76□□□□□ -0.69
PPP4R1-206ENST00000577779 YIPF7Q8N8F6 280 aa10.76□□□□□ -0.69
PPP4R1-206ENST00000577779 MINDY2Q8NBR6 621 aa10.76□□□□□ -0.69
PPP4R1-206ENST00000577779 APOL4Q9BPW4 351 aa10.76□□□□□ -0.69
PPP4R1-206ENST00000577779 ZFAND3Q9H8U3 227 aa10.76□□□□□ -0.69
PPP4R1-206ENST00000577779 SPAG4Q9NPE6 437 aa10.76□□□□□ -0.69
PPP4R1-206ENST00000577779 MAGEL2Q9UJ55 1249 aa10.76□□□□□ -0.69
PPP4R1-206ENST00000577779 SNX5Q9Y5X3 404 aa10.76□□□□□ -0.69
PPP4R1-206ENST00000577779 SHISA3A0PJX4 238 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 NPIPB11E5RHQ5 1161 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 HSPB6O14558 160 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 DEGS1O15121 323 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 ARPC1BO15143 372 aaKnown RBP10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 MAGEB4O15481 346 aaPredicted RBP10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 SYT7O43581 403 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 RGS11O94810 467 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 IGHV3-11P01762 117 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 SLC2A5P22732 501 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 SSTR5P35346 364 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 APOFQ13790 326 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 MICAQ29983 383 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 Q6P435 159 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 DNAAF1Q8NEP3 725 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 OR10A7Q8NGE5 316 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 OR51T1Q8NGJ9 327 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 MRGPRDQ8TDS7 321 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 CASTOR1Q8WTX7 329 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 LRGUKQ96M69 825 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 NSMCE2Q96MF7 247 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 MBOAT4Q96T53 435 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 THAP7Q9BT49 309 aaPredicted RBP10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 PLEKHA3Q9HB20 300 aa10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 DYNC1H1Q14204 4646 aaKnown RBP10.75□□□□□ -0.69
PPP4R1-206ENST00000577779 DNAH2Q9P225 4427 aa10.74□□□□□ -0.69
PPP4R1-206ENST00000577779 CNIH1O95406 144 aa10.74□□□□□ -0.69
PPP4R1-206ENST00000577779 IL3RAP26951 378 aa10.74□□□□□ -0.69
PPP4R1-206ENST00000577779 BLVRBP30043 206 aaPredicted RBP10.74□□□□□ -0.69
PPP4R1-206ENST00000577779 ACTR3P61158 418 aa10.74□□□□□ -0.69
PPP4R1-206ENST00000577779 PDZK1IP1Q13113 114 aa10.74□□□□□ -0.69
PPP4R1-206ENST00000577779 MMDQ15546 238 aa10.74□□□□□ -0.69
PPP4R1-206ENST00000577779 ZNF322Q6U7Q0 402 aaPredicted RBP10.74□□□□□ -0.69
PPP4R1-206ENST00000577779 CD300LDQ6UXZ3 194 aa10.74□□□□□ -0.69
PPP4R1-206ENST00000577779 NIPSNAP1Q9BPW8 284 aa10.74□□□□□ -0.69
PPP4R1-206ENST00000577779 SLC25A19Q9HC21 320 aa10.74□□□□□ -0.69
PPP4R1-206ENST00000577779 FAM53CQ9NYF3 392 aa10.74□□□□□ -0.69
PPP4R1-206ENST00000577779 IGKV1-12A0A0C4DH73 117 aa10.73□□□□□ -0.69
PPP4R1-206ENST00000577779 A0A1W2PN81 502 aa10.73□□□□□ -0.69
PPP4R1-206ENST00000577779 SOX15O60248 233 aa10.73□□□□□ -0.69
PPP4R1-206ENST00000577779 IGKV1D-12P01611 117 aa10.73□□□□□ -0.69
PPP4R1-206ENST00000577779 HLA-DRB1P01911 266 aa10.73□□□□□ -0.69
PPP4R1-206ENST00000577779 CHRNA7P36544 502 aa10.73□□□□□ -0.69
PPP4R1-206ENST00000577779 SMCPP49901 116 aaPredicted RBP10.73□□□□□ -0.69
PPP4R1-206ENST00000577779 RAB40BQ12829 278 aa10.73□□□□□ -0.69
PPP4R1-206ENST00000577779 GINS1Q14691 196 aa10.73□□□□□ -0.69
PPP4R1-206ENST00000577779 ECSCRQ19T08 205 aa10.73□□□□□ -0.69
PPP4R1-206ENST00000577779 LCN12Q6JVE5 192 aa10.73□□□□□ -0.69
PPP4R1-206ENST00000577779 CEMP1Q6PRD7 247 aaPredicted RBP10.73□□□□□ -0.69
PPP4R1-206ENST00000577779 TMEM106AQ96A25 262 aa10.73□□□□□ -0.69
PPP4R1-206ENST00000577779 RFT1Q96AA3 541 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms