RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 TRAPPC6BQ86SZ2 158 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 ENTHD1Q8IYW4 607 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 DHRSXQ8N5I4 330 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 TMEM104Q8NE00 496 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 OR11H1Q8NG94 326 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 OR13A1Q8NGR1 328 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 EAF1Q96JC9 268 aaPredicted RBP8.02□□□□□ -1.13
SF3B3-204ENST00000563739 ADI1Q9BV57 179 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 CHST5Q9GZS9 411 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 COMMD4Q9H0A8 199 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 KLK15Q9H2R5 256 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 GAL3ST2Q9H3Q3 398 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 ADGRL4Q9HBW9 690 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 HMG20AQ9NP66 347 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 TPSG1Q9NRR2 321 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 FAM118AQ9NWS6 357 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 KIAA1456Q9P272 454 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 WARS2Q9UGM6 360 aaKnown RBP8.02□□□□□ -1.13
SF3B3-204ENST00000563739 OR52A1Q9UKL2 312 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 TRGV10A0A0A0MS01 117 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 IGHV3-72A0A0B4J1Y9 119 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 LOC110117498-PIK3R3F6TDL0 507 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 J3QR06 171 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 AP4M1O00189 453 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF254O75437 659 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 TNFAIP8O95379 198 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 CSN2P05814 226 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 ELANEP08246 267 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 FAM106CPP0CH98 169 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 GP9P14770 177 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 PRKACAP17612 351 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 GABRB1P18505 474 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 PPIFP30405 207 aaKnown RBP8.01□□□□□ -1.13
SF3B3-204ENST00000563739 CEACAM3P40198 252 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 PTGFRP43088 359 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 RIDAP52758 137 aaKnown RBP8.01□□□□□ -1.13
SF3B3-204ENST00000563739 SLC35B1P78383 322 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 RUNX1Q01196 453 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 TMED1Q13445 227 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 CDK5R1Q15078 307 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 SLC25A30Q5SVS4 291 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 CCDC144NLQ6NUI1 221 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 CATSPERDQ86XM0 798 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 IZUMO1Q8IYV9 350 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 FAM58AQ8N1B3 248 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 FAM71E2Q8N5Q1 922 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF555Q8NEP9 628 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 OR9G1Q8NH87 305 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 DCUN1D4Q92564 292 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 RFKQ969G6 155 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 MOB1AQ9H8S9 216 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 LINC00574Q9H8X3 128 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 H2AFY2Q9P0M6 372 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-204ENST00000563739 PSG11Q9UQ72 335 aa8.01□□□□□ -1.13
SF3B3-204ENST00000563739 DNAH17Q9UFH2 4485 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 A0A1W2PPE3 182 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF729A6NN14 1252 aaPredicted RBP8□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF736B4DX44 427 aaPredicted RBP8□□□□□ -1.13
SF3B3-204ENST00000563739 SLC33A1O00400 549 aaPredicted RBP8□□□□□ -1.13
SF3B3-204ENST00000563739 MPZL2O60487 215 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 SMIM18P0DKX4 95 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 IGHV4-30-4P0DP06 118 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 MNDAP41218 407 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 KIR3DL2P43630 455 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 ATXN7L3Q14CW9 347 aaPredicted RBP8□□□□□ -1.13
SF3B3-204ENST00000563739 ODF4Q2M2E3 257 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 CXorf66Q5JRM2 361 aaPredicted RBP8□□□□□ -1.13
SF3B3-204ENST00000563739 SPIN3Q5JUX0 258 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 BCL2L15Q5TBC7 163 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF691Q5VV52 312 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 MEDAGQ5VYS4 303 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 TTC23Q5W5X9 447 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF322Q6U7Q0 402 aaPredicted RBP8□□□□□ -1.13
SF3B3-204ENST00000563739 HAPLN4Q86UW8 402 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 TGIF2LXQ8IUE1 241 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 FOXRED2Q8IWF2 684 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 SLC35F2Q8IXU6 374 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 APH1BQ8WW43 257 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 CYGBQ8WWM9 190 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 RPEQ96AT9 228 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 ISOC1Q96CN7 298 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 RNFT2Q96EX2 444 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 ADAT3Q96EY9 351 aaPredicted RBP8□□□□□ -1.13
SF3B3-204ENST00000563739 MNTQ99583 582 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 MROQ9BYG7 248 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 ALX4Q9H161 411 aaPredicted RBP8□□□□□ -1.13
SF3B3-204ENST00000563739 LIN7CQ9NUP9 197 aaKnown RBP8□□□□□ -1.13
SF3B3-204ENST00000563739 CLN6Q9NWW5 311 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF581Q9P0T4 197 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 AASSQ9UDR5 926 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF580Q9UK33 172 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 IKZF2Q9UKS7 526 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8□□□□□ -1.13
SF3B3-204ENST00000563739 TMEM14AQ9Y6G1 99 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 DNAH2Q9P225 4427 aa8□□□□□ -1.13
SF3B3-204ENST00000563739 PKHD1P08F94 4074 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 IGHV1-3A0A0C4DH29 117 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 KBTBD11-OT1A0A1B0GTJ5 212 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 A8MZ25 164 aa7.99□□□□□ -1.13
SF3B3-204ENST00000563739 NPIPB11E5RHQ5 1161 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms