RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 SPTSSAQ969W0 71 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 TMIGD2Q96BF3 282 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 SLAMF6Q96DU3 332 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 RAB3CQ96E17 227 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 WBP1Q96G27 269 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 OR4F4Q96R69 305 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 ZNF649Q9BS31 505 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 MED18Q9BUE0 208 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 TMED9Q9BVK6 235 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 SFXN3Q9BWM7 321 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 SLITRK2Q9H156 845 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 DCSTAMPQ9H295 470 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 TMEM38BQ9NVV0 291 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 MRPL22Q9NWU5 206 aaKnown RBP4.34□□□□□ -1.71
CHD9-205ENST00000562785 CKLFQ9UBR5 152 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 ZNF391Q9UJN7 358 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 COPS3Q9UNS2 423 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 UGT2A1Q9Y4X1 527 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 R4GMQ9 66 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 HCFC1P51610 2035 aa4.34□□□□□ -1.71
CHD9-205ENST00000562785 CEP250Q9BV73 2442 aa4.34□□□□□ -1.72
CHD9-205ENST00000562785 AHCTF1Q8WYP5 2266 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 NCKAP5O14513 1909 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 PNMA8CA0A1B0GUJ8 204 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 RNF222A6NCQ9 220 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 OR6C6A6NF89 314 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 FBLL1A6NHQ2 334 aaKnown RBP4.33□□□□□ -1.72
CHD9-205ENST00000562785 SRRM5B3KS81 715 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 LOC110117498-PIK3R3F6TDL0 507 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 F8WDY8 70 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 H3BSA7 217 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.33□□□□□ -1.72
CHD9-205ENST00000562785 GABRPO00591 440 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 PDCD5O14737 125 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 SGCEO43556 437 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 UBL3O95164 117 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 ADRA2AP08913 450 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 SNRPCP09234 159 aaKnown RBP4.33□□□□□ -1.72
CHD9-205ENST00000562785 KLK2P20151 261 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 S100A5P33763 92 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 ARR3P36575 388 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 RAG2P55895 527 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 NCS1P62166 190 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 RPS25P62851 125 aaKnown RBP4.33□□□□□ -1.72
CHD9-205ENST00000562785 SGCAQ16586 387 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 CEACAM16Q2WEN9 425 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 Q499Y3 187 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 LIPNQ5VXI9 398 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 FBXW9Q5XUX1 488 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 TMEM53Q6P2H8 277 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 LRRN1Q6UXK5 716 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 TFAP2EQ6VUC0 442 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 Q6ZT83 130 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 SSX8Q7RTT4 187 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 SSX6Q7RTT6 188 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 SLC16A14Q7RTX9 510 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 TPRA1Q86W33 373 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 C17orf78Q8N4C9 275 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 SLC22A24Q8N4F4 322 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 OR52H1Q8NGJ2 320 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 OR52B4Q8NGK2 314 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 OR5AK2Q8NH90 309 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 TSEN15Q8WW01 171 aaKnown RBP4.33□□□□□ -1.72
CHD9-205ENST00000562785 ITFG2Q969R8 447 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 CPNE2Q96FN4 548 aaPredicted RBP4.33□□□□□ -1.72
CHD9-205ENST00000562785 PGLYRP3Q96LB9 341 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 SH3GL3Q99963 347 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 DCUN1D5Q9BTE7 237 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 ZNF416Q9BWM5 594 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 TTTY10Q9BZA0 68 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 RGCCQ9H4X1 137 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 ISG20L2Q9H9L3 353 aaKnown RBP4.33□□□□□ -1.72
CHD9-205ENST00000562785 ELOVL3Q9HB03 270 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 ESM1Q9NQ30 184 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 ZNF581Q9P0T4 197 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 NUFIP1Q9UHK0 495 aaKnown RBP4.33□□□□□ -1.72
CHD9-205ENST00000562785 MRM2Q9UI43 246 aaKnown RBP4.33□□□□□ -1.72
CHD9-205ENST00000562785 RNF24Q9Y225 148 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 TIMM10BQ9Y5J6 103 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 LHFPL6Q9Y693 200 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 DOCK10Q96BY6 2186 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 MPDZO75970 2070 aa4.33□□□□□ -1.72
CHD9-205ENST00000562785 TNRC6AQ8NDV7 1962 aaKnown RBP4.33□□□□□ -1.72
CHD9-205ENST00000562785 IGKV1D-43A0A0B4J1Z2 117 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 A0A1B0GVI7 797 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 TMEM269A0A1B0GVZ9 245 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 LOC107986453A0A1B0GWG9 222 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 FAM230AA0A1W2PPH8 454 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 DHRS7CA6NNS2 312 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 CASKO14936 926 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 SLC19A2O60779 497 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 UPK3AO75631 287 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 SC5DO75845 299 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 CLPXO76031 633 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 RPP14O95059 124 aaKnown RBP4.32□□□□□ -1.72
CHD9-205ENST00000562785 TGM6O95932 706 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 IGHV3-9P01782 118 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 ISG15P05161 165 aa4.32□□□□□ -1.72
CHD9-205ENST00000562785 ERCC1P07992 297 aaPredicted RBP4.32□□□□□ -1.72
CHD9-205ENST00000562785 OCM2P0CE71 109 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms