RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 MPV17LQ2QL34 196 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 DEFB112Q30KQ8 113 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 KRTAP24-1Q3LI83 254 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 MIDNQ504T8 468 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 C12orf54Q6X4T0 127 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 ASCL4Q6XD76 172 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 C17orf107Q6ZR85 190 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 Q8N7P7 452 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 ZNF565Q8N9K5 539 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 OR4S1Q8NGB4 309 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 OR4D6Q8NGJ1 314 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 OR51T1Q8NGJ9 327 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 SPATA3Q8NHX4 192 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 FAM216AQ8WUB2 273 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 SSMEM1Q8WWF3 244 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 SGCDQ92629 289 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 ORAI1Q96D31 301 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 UNKLQ9H9P5 680 aaKnown RBP6.83□□□□□ -1.32
PSEN1-209ENST00000553855 PLGRKTQ9HBL7 147 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 VCX3AQ9NNX9 186 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 RAB9BQ9NP90 201 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 TAS2R3Q9NYW6 316 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 LSM2Q9Y333 95 aaKnown RBP6.83□□□□□ -1.32
PSEN1-209ENST00000553855 UBE2J1Q9Y385 318 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-209ENST00000553855 LRRC42Q9Y546 428 aa6.83□□□□□ -1.32
PSEN1-209ENST00000553855 ANK3Q12955 4377 aaKnown RBP6.83□□□□□ -1.32
PSEN1-209ENST00000553855 MEIKINA0A087WXM9 373 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 DNAJC9-AS1A6NH13 148 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 MCRIP1C9JLW8 97 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 RNASEK-C17orf49H0YIS7 233 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 SLC33A1O00400 549 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-209ENST00000553855 HOXA3O43365 443 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-209ENST00000553855 FCN3O75636 299 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 CSN2P05814 226 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 LMO1P25800 156 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 PSMB9P28065 219 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 OR3A1P47881 315 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 ARHGDIBP52566 201 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 RBM11P57052 281 aaKnown RBP6.82□□□□□ -1.32
PSEN1-209ENST00000553855 AESQ08117 197 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 KLRD1Q13241 179 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 ZNF273Q14593 569 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 ATXN7L3Q14CW9 347 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-209ENST00000553855 PIGYQ3MUY2 71 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 NHLRC3Q5JS37 347 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 UNQ9370/PRO34162Q6UXP9 181 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 Q6YL49 198 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 ZNF782Q6ZMW2 699 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-209ENST00000553855 PHC2Q8IXK0 858 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 PNKDQ8N490 385 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 TMEM86BQ8N661 226 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 TPRX1Q8N7U7 411 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 TNFRSF19Q9NS68 423 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 POMT1Q9Y6A1 747 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 SESN1Q9Y6P5 492 aa6.82□□□□□ -1.32
PSEN1-209ENST00000553855 A0A0U1RQK1 487 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 TMEM30CPA0ZSE6 113 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 ODAMA1E959 279 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A10PA6NDY2 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A18PA6NE21 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A16PA6NEW6 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A20PA6NIJ5 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A8PA6NJQ4 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A7PA6NKC0 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 ZNF729A6NN14 1252 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-209ENST00000553855 C17orf98A8MV24 154 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A22PA8MWA6 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A12PA8MX19 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A5PA8MXJ8 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A23PA8MXZ1 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 CLDN34H7C241 214 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 CCRL2O00421 344 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 TOR1AO14656 332 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 GEMIN2O14893 280 aaKnown RBP6.81□□□□□ -1.32
PSEN1-209ENST00000553855 PIN1P1O15428 100 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 CLPXO76031 633 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 ARG1P05089 322 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 MELTFP08582 738 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 UCHL1P09936 223 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A15PP0C7V4 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A13PP0C7W8 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A14PP0C7W9 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FAM90A24PP0C7X0 464 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 IGHV1-8P0DP01 117 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 MGMTP16455 207 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 CALRP27797 417 aaKnown RBP6.81□□□□□ -1.32
PSEN1-209ENST00000553855 HTR2CP28335 458 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 SAA4P35542 130 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 GLP1RP43220 463 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 GLIPR1P48060 266 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 RPS25P62851 125 aaKnown RBP6.81□□□□□ -1.32
PSEN1-209ENST00000553855 EMX1Q04741 257 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-209ENST00000553855 FOXL1Q12952 345 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 SLC9A3R2Q15599 337 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 ASPHD2Q6ICH7 369 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 Q6P435 159 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 C16orf87Q6PH81 154 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 ZNF773Q6PK81 442 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 RNF144BQ7Z419 303 aa6.81□□□□□ -1.32
PSEN1-209ENST00000553855 RTN4RL2Q86UN3 420 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms