RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 ZC3H12DA2A288 527 aaKnown RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 A6NCN8 305 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 B4E171 279 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 C17orf112F2Z3M2 114 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 PRICKLE3O43900 615 aaPredicted RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 MPDU1O75352 247 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 TIAF1O95411 115 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 CNOT4O95628 575 aaKnown RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 HPRT1P00492 218 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 TMIGD3P0DMS9 266 aaPredicted RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 VSIG8P0DPA2 414 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 BMI1P35226 326 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 KIR2DS4P43632 304 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 GALR1P47211 349 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 EFNB2P52799 333 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 PTTG1IPP53801 180 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 ERVFRD-1P60508 538 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 ERVS71-1P61550 626 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 SUPT4H1P63272 117 aaKnown RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 IGLV3-21P80748 117 aaPredicted RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 QRFPP83859 136 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 EWSR1Q01844 656 aaKnown RBP eCLIP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 MEF2BQ02080 365 aaPredicted RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 RPL18Q07020 188 aaKnown RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 UBE2V1Q13404 147 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 KIR2DS1Q14954 304 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 CNN3Q15417 329 aaKnown RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 NSDHLQ15738 373 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 EXT1Q16394 746 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 OR10J3Q5JRS4 329 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 FBXW9Q5XUX1 488 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 MRPL54Q6P161 138 aaKnown RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 TEX43Q6ZNM6 134 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 GALNTL5Q7Z4T8 443 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 LINC00596Q86U02 117 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 FAM219AQ8IW50 185 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 ZNF100Q8IYN0 542 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 PRSS58Q8IYP2 241 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 IL22RA1Q8N6P7 574 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 RTN4IP1Q8WWV3 396 aaPredicted RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 ROBO4Q8WZ75 1007 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 ST8SIA1Q92185 356 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 FRZBQ92765 325 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 NAT6Q93015 286 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 LIN37Q96GY3 246 aaPredicted RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 SNX22Q96L94 193 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 TMEM56Q96MV1 263 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 CIB3Q96Q77 187 aaPredicted RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 INSM2Q96T92 566 aaPredicted RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 GPER1Q99527 375 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 SNHG12Q9BXW3 62 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 ZNF552Q9H707 407 aaPredicted RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 CNTD2Q9H8S5 307 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 TMEM106BQ9NUM4 274 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 OCIAD1Q9NX40 245 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 TAS2R4Q9NYW5 299 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 OR6C3Q9NZP0 311 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 PRSS50Q9UI38 385 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 ANXA10Q9UJ72 324 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 SLC45A2Q9UMX9 530 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 LAMP3Q9UQV4 416 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 LSM5Q9Y4Y9 91 aaKnown RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 LRP12Q9Y561 859 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 MRPS18BQ9Y676 258 aaKnown RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 TMEM56-RWDD3S4R434 201 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 BSNQ9UPA5 3926 aa4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 GCN1Q92616 2671 aaKnown RBP4.9□□□□□ -1.63
TMEM106C-221ENST00000553217 MGAQ8IWI9 3026 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 MPDZO75970 2070 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 TRAV30A0A087WSZ9 112 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 FEZF1A0PJY2 475 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 MSGN1A6NI15 193 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 IFITM10A6NMD0 228 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 ZNF814B7Z6K7 855 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 J3QR89 54 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 CDIPTO14735 213 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 TNFRSF10CO14798 259 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 DEGS1O15121 323 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 TMPRSS2O15393 492 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 SIAH2O43255 324 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 TRAF3IP2O43734 574 aaPredicted RBP4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 IL33O95760 270 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 TOMM40O96008 361 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 IL6RP08887 468 aaPredicted RBP4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 LIPCP11150 499 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 GP1BBP13224 206 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 TCN2P20062 427 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 AADACP22760 399 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 CTSSP25774 331 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 PSMB5P28074 263 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 GNRHRP30968 328 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 BRS3P32247 399 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 APLNRP35414 380 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 CEACAM3P40198 252 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 RPL29P47914 159 aaKnown RBP4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 PIGPP57054 158 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 BPIFB3P59826 476 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 PPP1CBP62140 327 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 YPEL5P62699 121 aa4.89□□□□□ -1.63
TMEM106C-221ENST00000553217 RPS15P62841 145 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms