RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 FAM27D1Q5T7N8 215 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 AWAT2Q6E213 333 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 ZNF367Q7RTV3 350 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 CEACAM19Q7Z692 300 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 LHFPL4Q7Z7J7 247 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 LRRTM1Q86UE6 522 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 RTN4RL2Q86UN3 420 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 SUMF2Q8NBJ7 301 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 PLPPR1Q8TBJ4 325 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 SSX3Q99909 188 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 CLEC7AQ9BXN2 247 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 SPACA1Q9HBV2 294 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 TCF7L1Q9HCS4 588 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 ZNF581Q9P0T4 197 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 KIF25Q9UIL4 384 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 NBEAL1Q6ZS30 2694 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 KIAA2026Q5HYC2 2103 aa9.62□□□□□ -0.87
YBX3-217ENST00000546164 MGAM2Q2M2H8 2515 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 TRRAPQ9Y4A5 3859 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 MEIKINA0A087WXM9 373 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 NPIPB11E5RHQ5 1161 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 H3BUX3 64 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 UBBP0CG47 229 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 HSMCR30P0CW71 290 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 MDKP21741 143 aaPredicted RBP9.61□□□□□ -0.87
YBX3-217ENST00000546164 PRAMEF5Q5TYX0 476 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 GLT8D1Q68CQ7 371 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 SLC35E4Q6ICL7 350 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 TMEM91Q6ZNR0 172 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 ZNF565Q8N9K5 539 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 TMEM104Q8NE00 496 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 OR13A1Q8NGR1 328 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 PIFOQ8TCI5 191 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 TAF15Q92804 592 aaKnown RBP eCLIP9.61□□□□□ -0.87
YBX3-217ENST00000546164 TMEM203Q969S6 136 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 YTHDF1Q9BYJ9 559 aaKnown RBP9.61□□□□□ -0.87
YBX3-217ENST00000546164 SLITRK2Q9H156 845 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 BEX1Q9HBH7 125 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 ACOT13Q9NPJ3 140 aa9.61□□□□□ -0.87
YBX3-217ENST00000546164 RRP15Q9Y3B9 282 aaKnown RBP9.61□□□□□ -0.87
YBX3-217ENST00000546164 TMEM30CPA0ZSE6 113 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 CLPSL1A2RUU4 121 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 H3BUI4 141 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 ARL6IP5O75915 188 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 TSPAN9O75954 239 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 IL1AP01583 271 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 IGLV1-47P01700 117 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 GLAP06280 429 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 MGMTP16455 207 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 GABRA5P31644 462 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 GDNFP39905 211 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 DYNLT3P51808 116 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 RPS25P62851 125 aaKnown RBP9.6□□□□□ -0.87
YBX3-217ENST00000546164 DYNC1I2Q13409 638 aaKnown RBP9.6□□□□□ -0.87
YBX3-217ENST00000546164 SHISA2Q6UWI4 295 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 LIAT1Q6ZQX7 453 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 DYNAPQ8N1N2 210 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 GAPTQ8N292 157 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 ABHD12Q8N2K0 398 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 OR10A7Q8NGE5 316 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 OR4P4Q8NGL7 312 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 ZNF596Q8TC21 504 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 KIRREL1Q96J84 757 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 Q96M66 194 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 CST11Q9H112 138 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 ING3Q9NXR8 418 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 CALYQ9NYX4 217 aa9.6□□□□□ -0.87
YBX3-217ENST00000546164 SLC22A1O15245 554 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 CA11O75493 328 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 GZMHP20718 246 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 OMGP23515 440 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 PAX6P26367 422 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 HTR1DP28221 377 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 GLP1RP43220 463 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 EMX1Q04741 257 aaPredicted RBP9.59□□□□□ -0.87
YBX3-217ENST00000546164 RBM39Q14498 530 aaKnown RBP9.59□□□□□ -0.87
YBX3-217ENST00000546164 SSX1Q16384 188 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 SSX2Q16385 188 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 ATAD3CQ5T2N8 411 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 OLFML2AQ68BL7 652 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 DHRS7BQ6IAN0 325 aaPredicted RBP9.59□□□□□ -0.87
YBX3-217ENST00000546164 BAIAP2L2Q6UXY1 529 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 ZNF497Q6ZNH5 498 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 SLC16A12Q6ZSM3 486 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 Q6ZSV7 163 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 SVOPQ8N4V2 548 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 OR6M1Q8NGM8 313 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 LINC01006Q8NI28 216 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 SELENOIQ9C0D9 397 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 BANF2Q9H503 90 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 C16orf95Q9H693 158 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 ZNF286AQ9HBT8 521 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 RAB18Q9NP72 206 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 DPM3Q9P2X0 92 aa9.59□□□□□ -0.87
YBX3-217ENST00000546164 MCRIP1C9JLW8 97 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 CRTAPO75718 401 aaPredicted RBP9.58□□□□□ -0.88
YBX3-217ENST00000546164 MT-ND4P03905 459 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 VSIG8P0DPA2 414 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 FUT3P21217 361 aa9.58□□□□□ -0.88
YBX3-217ENST00000546164 HTR2CP28335 458 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms