RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	ACSM4	P0C7M7	580 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	CTLA4	P16410	223 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	CRABP1	P29762	137 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	RPL4	P36578	427 aa	Known RBP	4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	DDOST	P39656	456 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	GSK3B	P49841	420 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	PRKCD	Q05655	676 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	EGFEM1P	Q0D2K5	195 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	RSPO1	Q2MKA7	263 aa	Predicted RBP	4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	KRT71	Q3SY84	523 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	EPGN	Q6UW88	154 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	UNQ9370/PRO34162	Q6UXP9	181 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	MRPL21	Q7Z2W9	205 aa	Known RBP	4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	OR9Q1	Q8NGQ5	310 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	TAMM41	Q96BW9	452 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	C4orf36	Q96KX1	117 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	UHRF2	Q96PU4	802 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	OR52B2	Q96RD2	323 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	CCL13	Q99616	98 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	CGREF1	Q99674	301 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	MCRIP2	Q9BUT9	160 aa	Known RBP	4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	IKZF5	Q9H5V7	419 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	HEXA-AS1	Q9H8Q6	139 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	TMBIM4	Q9HC24	238 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	PITPNC1	Q9UKF7	332 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	NDUFAF1	Q9Y375	327 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585		U3KQK5	164 aa		4.81	□□□□□ -1.64
CPSF7-222	ENST00000544585	RYR1	P21817	5038 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	MSGN1	A6NI15	193 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	EFCAB9	A8MZ26	197 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	SMIM1	B2RUZ4	78 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585		H3BTX0	84 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	BHLHE40	O14503	412 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	BUB3	O43684	328 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	FCN3	O75636	299 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	ALDOB	P05062	364 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	FCER2	P06734	321 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	PRSS1	P07477	247 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	GGT2	P36268	569 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	KRTAP10-11	P60412	298 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	EXOSC2	Q13868	293 aa	Known RBP	4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	KRTAP27-1	Q3LI81	207 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	ZBED5	Q49AG3	693 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	STEAP1B	Q6NZ63	245 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	DNM1P34	Q6PK57	102 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	ZNF826P	Q6ZT77	177 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	NAA40	Q86UY6	237 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	C11orf53	Q8IXP5	236 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	OR5AU1	Q8NGC0	362 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	OR5AP2	Q8NGF4	316 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	OR10A6	Q8NH74	314 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	PIFO	Q8TCI5	191 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	LZIC	Q8WZA0	190 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	RORB	Q92753	470 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	LYZL4	Q96KX0	146 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585		Q96M85	177 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	PITX2	Q99697	317 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	SH3GL1	Q99961	368 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	ADAT1	Q9BUB4	502 aa	Known RBP	4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	CCDC28B	Q9BUN5	200 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	VCX2	Q9H322	139 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	RERGL	Q9H628	205 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	KAT8	Q9H7Z6	458 aa	Known RBP	4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	SLC25A19	Q9HC21	320 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	POLR1D	Q9Y2S0	133 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	HYDIN	Q4G0P3	5121 aa		4.8	□□□□□ -1.64
CPSF7-222	ENST00000544585	IGHV3OR15-7	A0A075B7D8	119 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	TRAV27	A0A087WT01	109 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	TCRBV4S1A1T	A0A5B7	111 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	RNF222	A6NCQ9	220 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585		H7C1C5	153 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	ANGPTL7	O43827	346 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	TSC22D2	O75157	780 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	FAM107A	O95990	144 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	SLC18A1	P54219	525 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	CAV3	P56539	151 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	LCN6	P62502	163 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	CSNK2B	P67870	215 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	KLRD1	Q13241	179 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	FHL1	Q13642	323 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	CYLC2	Q14093	348 aa	Predicted RBP	4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	TRAM2	Q15035	370 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	TATDN3	Q17R31	274 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	MEST	Q5EB52	335 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	TNFAIP8L3	Q5GJ75	292 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	FAM122B	Q7Z309	247 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	DPY19L4	Q7Z388	723 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	LHFPL4	Q7Z7J7	247 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	NRM	Q8IXM6	262 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	ZNF679	Q8IYX0	411 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	PNKD	Q8N490	385 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	GVQW1	Q8N7I0	195 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	CYB561A3	Q8NBI2	242 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	SDR9C7	Q8NEX9	313 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	OR1M1	Q8NGA1	313 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	OR8S1	Q8NH09	359 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	LRRC29	Q8WV35	223 aa		4.79	□□□□□ -1.64
CPSF7-222	ENST00000544585	H1FX	Q92522	213 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms