RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 CHD6Q8TD26 2715 aa5.77□□□□□ -1.49
CDH19-203ENST00000540086 TRBV6-6A0A0A6YYG2 114 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 A0A0A6YYJ9 748 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 TMEM30CPA0ZSE6 113 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 A1L4Q6 167 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 TRDCB7Z8K6 153 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 LGALS8O00214 317 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 BET1O15155 118 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 LY6HO94772 140 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 VSIG10L2P0DP72 767 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 GLIPR1P48060 266 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 SEC61A1P61619 476 aaKnown RBP5.76□□□□□ -1.49
CDH19-203ENST00000540086 BAMBIQ13145 260 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 ZMYND11Q15326 602 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 KRBOX4Q5JUW0 171 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 ATPAF1Q5TC12 328 aaPredicted RBP5.76□□□□□ -1.49
CDH19-203ENST00000540086 TEX36Q5VZQ5 186 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 ZNF880Q6PDB4 577 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 TMED4Q7Z7H5 227 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 DTX2Q86UW9 622 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 TMEM17Q86X19 198 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 C1orf87Q8N0U7 546 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 GAPTQ8N292 157 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 PRR18Q8N4B5 295 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 FAM216BQ8N7L0 139 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 TERB2Q8NHR7 220 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 MARCH1Q8TCQ1 289 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 GAFA1Q96PS6 74 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 SLC25A21Q9BQT8 299 aaPredicted RBP5.76□□□□□ -1.49
CDH19-203ENST00000540086 SEC22CQ9BRL7 303 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 ZNF2Q9BSG1 426 aaPredicted RBP5.76□□□□□ -1.49
CDH19-203ENST00000540086 TRAF4Q9BUZ4 470 aaPredicted RBP5.76□□□□□ -1.49
CDH19-203ENST00000540086 LIME1Q9H400 295 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 TRAPPC2LQ9UL33 140 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 VSIG4Q9Y279 399 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 MAB21L2Q9Y586 359 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 CACNA1DQ01668 2161 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 KMT2BQ9UMN6 2715 aaPredicted RBP5.76□□□□□ -1.49
CDH19-203ENST00000540086 COL12A1Q99715 3063 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 FAM208BQ5VWN6 2430 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 HCFC1P51610 2035 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 PPIAL4EA0A075B759 164 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 MEIKINA0A087WXM9 373 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 IGKV1-6A0A0C4DH72 117 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 KIR2DS1A0A191URI9 304 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 OR5H14A6NHG9 310 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 PPIAL4DF5H284 164 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 H7C1Q1 480 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 PPIAL4FP0DN26 164 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 MUC1P15941 1255 aaPredicted RBP5.76□□□□□ -1.49
CDH19-203ENST00000540086 PI3P19957 117 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 NFYAP23511 347 aaPredicted RBP5.76□□□□□ -1.49
CDH19-203ENST00000540086 COL8A2P25067 703 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 FCGR2CP31995 323 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 CDKN1AP38936 164 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 KIR2DS4P43632 304 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 RAG2P55895 527 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 HLA-DRB3P79483 266 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 CD300CQ08708 224 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 CBX3Q13185 183 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 KIR2DS1Q14954 304 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 HERPUD1Q15011 391 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 SRSF7Q16629 238 aaKnown RBP eCLIP5.76□□□□□ -1.49
CDH19-203ENST00000540086 HFEQ30201 348 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 AADACL3Q5VUY0 350 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 DMRTA1Q5VZB9 504 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 Q6ZS49 121 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 MOB1BQ7L9L4 216 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 TMEM185AQ8NFB2 350 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 OR6F1Q8NGZ6 308 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 CAPSLQ8WWF8 208 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 SDSLQ96GA7 329 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 SNX22Q96L94 193 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 DCTN5Q9BTE1 182 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 RAB1BQ9H0U4 201 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 SEBOXQ9HB31 216 aaPredicted RBP5.76□□□□□ -1.49
CDH19-203ENST00000540086 PPIAL4AQ9Y536 164 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 LRRK2Q5S007 2527 aa5.76□□□□□ -1.49
CDH19-203ENST00000540086 TRAV38-1A0A0B4J264 116 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 C7orf66A4D0T2 115 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 K7N7A8 449 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 CLDN1O95832 211 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 TK1P04183 234 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 PGAM2P15259 253 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 ATF4P18848 351 aaPredicted RBP5.75□□□□□ -1.49
CDH19-203ENST00000540086 GLP1RP43220 463 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 KCNJ3P48549 501 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 EDDM3BP56851 147 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 FXYD4P59646 89 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 ZNF660Q6AZW8 331 aaPredicted RBP5.75□□□□□ -1.49
CDH19-203ENST00000540086 SLC35E4Q6ICL7 350 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 ZNF788Q6ZQV5 615 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 LHFPL1Q86WI0 220 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 FGFRL1Q8N441 504 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 ZNF561Q8N587 486 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 ADAD2Q8NCV1 583 aaKnown RBP5.75□□□□□ -1.49
CDH19-203ENST00000540086 OR52B4Q8NGK2 314 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 OR13A1Q8NGR1 328 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 MRGPRDQ8TDS7 321 aa5.75□□□□□ -1.49
CDH19-203ENST00000540086 IL1F10Q8WWZ1 152 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms