RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 A0A0A6YYH2 397 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 TRBV5-5A0A0J9YX44 114 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 TEX13DA0A0J9YY54 714 aaPredicted RBP2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 A0A1B0GTI1 187 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 KBTBD11-OT1A0A1B0GTJ5 212 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 A0A1W2PPI3 338 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 A0A1W2PRG6 482 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 OR6C6A6NF89 314 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 TVP23AA6NH52 213 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 FBLL1A6NHQ2 334 aaKnown RBP2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 A6NJ64 397 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 FAM74A7A6NL05 159 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 CENPBD1B2RD01 187 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 H0YL77 283 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 SIRPB1O00241 398 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 PRKYO43930 277 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 SOX15O60248 233 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 FCN3O75636 299 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 OR2J3O76001 311 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 CCNB2O95067 398 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 NDUFB2O95178 105 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 LY6G6DO95868 133 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 CST1P01037 141 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 CST2P09228 141 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 UBCP0CG48 685 aaKnown RBP2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 IGHV4-31P0DP07 118 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 MYOD1P15172 320 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 ZNF250P15622 560 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 SELEP16581 610 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 SPI1P17947 270 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 SLC2A5P22732 501 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 GLRA1P23415 457 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 CD40LGP29965 261 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 IL2RGP31785 369 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 ARR3P36575 388 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 PMELP40967 661 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 NKX2-1P43699 371 aaPredicted RBP2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 FABP6P51161 128 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 RAG2P55895 527 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 TGFBR3Q03167 851 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 CHRNB3Q05901 458 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 CD47Q08722 323 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 RIPPLY1Q0D2K3 151 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 PSG7Q13046 419 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 KRR1Q13601 381 aaKnown RBP2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 FLOT2Q14254 428 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 RBM39Q14498 530 aaKnown RBP2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 GINS1Q14691 196 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 ATP6AP1Q15904 470 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 FAM106AQ4KMX7 169 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 SLC22A6Q4U2R8 563 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 FAM74A3Q4VXF1 159 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 KLHL12Q53G59 568 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 THEM4Q5T1C6 240 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 GPR157Q5UAW9 335 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 KDM4DQ6B0I6 523 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 C22orf42Q6IC83 251 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 LAIR2Q6ISS4 152 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 ZNF841Q6ZN19 808 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 Q6ZR03 302 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 PLEKHG7Q6ZR37 379 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 RASSF6Q6ZTQ3 369 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 SLC16A14Q7RTX9 510 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 MUC15Q8N387 334 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 SVOPLQ8N434 492 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 RFLNBQ8N5W9 214 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 ZNF525Q8N782 197 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 C15orf54Q8N8G6 183 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 PRR26Q8N8Z3 221 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 LRTM2Q8N967 370 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 SLC30A7Q8NEW0 376 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 SDR9C7Q8NEX9 313 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 NUP37Q8NFH4 326 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 PROKR2Q8NFJ6 384 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 SLC26A10Q8NG04 563 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 OR2AK2Q8NG84 335 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 OR10G2Q8NGC3 310 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 OR52E2Q8NGJ4 325 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 OR9Q1Q8NGQ5 310 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 MARCH1Q8TCQ1 289 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 GNPDA2Q8TDQ7 276 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 RPL3LQ92901 407 aaKnown RBP2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 DLX4Q92988 240 aaPredicted RBP2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 YIPF5Q969M3 257 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 MRPL24Q96A35 216 aaKnown RBP2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 TMIGD2Q96BF3 282 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 MED30Q96HR3 178 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 CCL19Q99731 98 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 SLC6A7Q99884 636 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 ZNF649Q9BS31 505 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 TSSK6Q9BXA6 273 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 FGF23Q9GZV9 251 aaPredicted RBP2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 RERGLQ9H628 205 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 NIPAL2Q9H841 368 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 CACYBPQ9HB71 228 aaKnown RBP2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 CA10Q9NS85 328 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 TECRQ9NZ01 308 aaKnown RBP2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 TREM2Q9NZC2 230 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 CLN8Q9UBY8 286 aa2.11□□□□□ -2.07
TNFRSF1A-210ENST00000537842 CYB5R1Q9UHQ9 305 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms