RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 TNFRSF14Q92956 283 aa11.88□□□□□ -0.51
CPSF1-206ENST00000531480 FAM46BQ96A09 425 aa11.88□□□□□ -0.51
CPSF1-206ENST00000531480 DPCDQ9BVM2 203 aaPredicted RBP11.88□□□□□ -0.51
CPSF1-206ENST00000531480 LPAR5Q9H1C0 372 aa11.88□□□□□ -0.51
CPSF1-206ENST00000531480 KCNK15Q9H427 330 aa11.88□□□□□ -0.51
CPSF1-206ENST00000531480 DAPK2Q9UIK4 370 aa11.88□□□□□ -0.51
CPSF1-206ENST00000531480 A0A0A6YYD4 124 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 TMEM272A0A1B0GTI8 110 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 A0A1W2PPH5 198 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 hADV38S2A0JD32 116 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 FUOMA2VDF0 154 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 PDCD6O75340 191 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 TPPPO94811 219 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 TOX4O94842 621 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 FUT3P21217 361 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 PRTN3P24158 256 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 CHATP28329 748 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 TGFBR1P36897 503 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 GLIPR1P48060 266 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 EDDM3BP56851 147 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 SLC35E4Q6ICL7 350 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 C9orf139Q6ZV77 190 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 IL17RELQ6ZVW7 336 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 CMTM4Q8IZR5 234 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 OR6Q1Q8NGQ2 317 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 PLPPR1Q8TBJ4 325 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 METTL8Q9H825 291 aaKnown RBP11.87□□□□□ -0.51
CPSF1-206ENST00000531480 LINC00574Q9H8X3 128 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 LIN7BQ9HAP6 207 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 RAB22AQ9UL26 194 aa11.87□□□□□ -0.51
CPSF1-206ENST00000531480 UBE2J1Q9Y385 318 aaPredicted RBP11.87□□□□□ -0.51
CPSF1-206ENST00000531480 JMJD1CQ15652 2540 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 A0A1W2PQ09 198 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 ODAMA1E959 279 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 CLEC2LP0C7M8 214 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 ZNF728P0DKX0 622 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 SLC2A2P11168 524 aaPredicted RBP11.86□□□□□ -0.51
CPSF1-206ENST00000531480 SRD5A1P18405 259 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 RAB6AP20340 208 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 BPIFB3P59826 476 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 PITPNAQ00169 270 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 AESQ08117 197 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 EDDM3AQ14507 147 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 ATXN7L3Q14CW9 347 aaPredicted RBP11.86□□□□□ -0.51
CPSF1-206ENST00000531480 KRBOX4Q5JUW0 171 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 VMO1Q7Z5L0 202 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 FAM185AQ8N0U4 392 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 BPIFB2Q8N4F0 458 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 TPRX1Q8N7U7 411 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 S100A16Q96FQ6 103 aaKnown RBP11.86□□□□□ -0.51
CPSF1-206ENST00000531480 NICN1Q9BSH3 213 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 URM1Q9BTM9 101 aaKnown RBP11.86□□□□□ -0.51
CPSF1-206ENST00000531480 BARHL1Q9BZE3 327 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 TAS2R3Q9NYW6 316 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 ONECUT1Q9UBC0 465 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 COMMD3Q9UBI1 195 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 SPATA2Q9UM82 520 aa11.86□□□□□ -0.51
CPSF1-206ENST00000531480 CENPVL3A0A0U1RRI6 287 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 METTL21EPA6NDL7 271 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 FAM25AB3EWG3 89 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 FAM25CB3EWG5 89 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 FAM25GB3EWG6 89 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 CA11O75493 328 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 APOA1P02647 267 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 CCL3L1P16619 93 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 PLA2G7Q13093 441 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 RBM39Q14498 530 aaKnown RBP11.85□□□□□ -0.51
CPSF1-206ENST00000531480 RAB12Q6IQ22 244 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 HCP5Q6MZN7 132 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 ZNF497Q6ZNH5 498 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 ZNF714Q96N38 554 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 PCGF1Q9BSM1 259 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 OR6C3Q9NZP0 311 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 NUP50Q9UKX7 468 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 HSF4Q9ULV5 492 aa11.85□□□□□ -0.51
CPSF1-206ENST00000531480 A0A0A6YYH2 397 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 A0A0B4J203 849 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 SMIM30A4D0T7 59 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 A6NJ64 397 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 MCRIP1C9JLW8 97 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 HSPB6O14558 160 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 IGHV4-38-2P0DP08 117 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 EFNB2P52799 333 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 TMEM50BP56557 158 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 ARL6IP1Q15041 203 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 UBE2NLQ5JXB2 153 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 ATAD3CQ5T2N8 411 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 DIRAS2Q96HU8 199 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 PALMDQ9NP74 551 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 DIABLOQ9NR28 239 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 KIF25Q9UIL4 384 aa11.84□□□□□ -0.51
CPSF1-206ENST00000531480 TRGV10A0A0A0MS01 117 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 TRAV40A0A0B4J280 105 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 hCG_1809904A0A1W2PP81 198 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 A0A1W2PPE2 198 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 A0A1W2PR64 198 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 A0A1W2PRV1 198 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 FABP12A6NFH5 140 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 RNASEK-C17orf49H0YIS7 233 aa11.83□□□□□ -0.52
CPSF1-206ENST00000531480 RAB27BO00194 218 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms