RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 NMNAT1Q9HAN9 279 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-212ENST00000529046 LPAR2Q9HBW0 351 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 ESM1Q9NQ30 184 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 POLE4Q9NR33 117 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 CACNG2Q9Y698 323 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 PKD1L1Q8TDX9 2849 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 A0A087WUU8 490 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 TEX48A0A1B0GUV7 120 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 PRSS37A4D1T9 235 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 OR6C6A6NF89 314 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 IQCF6A8MYZ5 107 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 KPNA4O00629 521 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-212ENST00000529046 XKRYO14609 159 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 IMPA2O14732 288 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 FFAR1O14842 300 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 ARPC3O15145 178 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 SGCEO43556 437 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 IFNW1P05000 195 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 CD14P08571 375 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 AZU1P20160 251 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 CCNOP22674 350 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 CRABP1P29762 137 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 MDH2P40926 338 aaKnown RBP3.54□□□□□ -1.84
CSDE1-212ENST00000529046 OR1E2P47887 323 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 SRP9P49458 86 aaKnown RBP3.54□□□□□ -1.84
CSDE1-212ENST00000529046 ERVK-25P63136 954 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 LCN2P80188 198 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 FMODQ06828 376 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 ALKBH6Q3KRA9 238 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 ZBED5Q49AG3 693 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 CYBRD1Q53TN4 286 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 TTMPQ5BVD1 217 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 AVPI1Q5T686 147 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 RNLSQ5VYX0 342 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 C16orf87Q6PH81 154 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 BTNL3Q6UXE8 466 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 DPY19L2P2Q6ZN68 376 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 Q6ZR03 302 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 MBOAT2Q6ZWT7 520 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 CEACAM19Q7Z692 300 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 MICU2Q8IYU8 434 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 TMEM86BQ8N661 226 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 OR8G5Q8NG78 346 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 OR56B1Q8NGI3 324 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 OR52E2Q8NGJ4 325 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 OR13G1Q8NGZ3 307 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 AKR7LQ8NHP1 331 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 DYDC1Q8WWB3 177 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 GIMAP1Q8WWP7 306 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 GEMIN6Q8WXD5 167 aaKnown RBP3.54□□□□□ -1.84
CSDE1-212ENST00000529046 APOBEC3DQ96AK3 386 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-212ENST00000529046 CMBLQ96DG6 245 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 COQ7Q99807 217 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 SLC6A7Q99884 636 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 HOPXQ9BPY8 73 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-212ENST00000529046 SLC30A2Q9BRI3 323 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 FUNDC2Q9BWH2 189 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 SLC22A4Q9H015 551 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 HDHD2Q9H0R4 259 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 SP140LQ9H930 580 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 TMEM165Q9HC07 324 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 SLC25A19Q9HC21 320 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 SAR1AQ9NR31 198 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 MMP26Q9NRE1 261 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 SMPD3Q9NY59 655 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-212ENST00000529046 MIOXQ9UGB7 285 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 MGAT4AQ9UM21 535 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 SIGLEC7Q9Y286 467 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 STARD10Q9Y365 291 aa3.54□□□□□ -1.84
CSDE1-212ENST00000529046 NOP16Q9Y3C1 178 aaKnown RBP3.54□□□□□ -1.84
CSDE1-212ENST00000529046 IGHV2-70DA0A0C4DH43 119 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 A0A0G2JND7 137 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 XKRY2A2RUG3 117 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 ISPDA4D126 451 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 EFCAB9A8MZ26 197 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 CDC42EP2O14613 210 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 MRASO14807 208 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 PHYHO14832 338 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 NDUFA2O43678 99 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 TIMM8AO60220 97 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-212ENST00000529046 GMDSO60547 372 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 ATP6V1G1O75348 118 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 NDUFB2O95178 105 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 NDUFA7O95182 113 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 TROVE2P10155 538 aaKnown RBP eCLIP3.53□□□□□ -1.84
CSDE1-212ENST00000529046 IFI30P13284 250 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 CTLA4P16410 223 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 OTX1P32242 354 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-212ENST00000529046 CD80P33681 288 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 CFHR2P36980 270 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 TAGLN2P37802 199 aaKnown RBP3.53□□□□□ -1.84
CSDE1-212ENST00000529046 OMPP47874 163 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 SLC7A2P52569 658 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 SPIBQ01892 262 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 GABPB1Q06547 395 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-212ENST00000529046 ECH1Q13011 328 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 ZMYND11Q15326 602 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 SLC9A3R2Q15599 337 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 KCNJ8Q15842 424 aa3.53□□□□□ -1.84
CSDE1-212ENST00000529046 RSPO1Q2MKA7 263 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms