RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 PLGRKTQ9HBL7 147 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 ZNF580Q9UK33 172 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 GSTK1Q9Y2Q3 226 aa7.43□□□□□ -1.22
SDC2-207ENST00000522911 DYNC2H1Q8NCM8 4307 aaKnown RBP7.42□□□□□ -1.22
SDC2-207ENST00000522911 HUWE1Q7Z6Z7 4374 aaKnown RBP7.42□□□□□ -1.22
SDC2-207ENST00000522911 OR4C45A6NMZ5 311 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 J3QR06 171 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 SLC16A6O15403 523 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 PFDN1O60925 122 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 IL1AP01583 271 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 ZNF20P17024 532 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 C21orf33P30042 268 aaPredicted RBP7.42□□□□□ -1.22
SDC2-207ENST00000522911 OR3A4PP47883 348 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 NANOS3P60323 173 aaKnown RBP7.42□□□□□ -1.22
SDC2-207ENST00000522911 SLC35B1P78383 322 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 ZNF816Q0VGE8 651 aaPredicted RBP7.42□□□□□ -1.22
SDC2-207ENST00000522911 MADCAM1Q13477 382 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 IL13RA2Q14627 380 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 Q3ZCU0 254 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 DEFB121Q5J5C9 76 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 RDH10Q8IZV5 341 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 DHRSXQ8N5I4 330 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 PARP16Q8N5Y8 322 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 C8orf31Q8N9H6 132 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 TOMM40LQ969M1 308 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 RPEQ96AT9 228 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 CPNE2Q96FN4 548 aaPredicted RBP7.42□□□□□ -1.22
SDC2-207ENST00000522911 TBX5Q99593 518 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 IFT22Q9H7X7 185 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 GNG8Q9UK08 70 aa7.42□□□□□ -1.22
SDC2-207ENST00000522911 CCRL2O00421 344 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 INMTO95050 263 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 APOL3O95236 402 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 SNRNP70P08621 437 aaKnown RBP7.41□□□□□ -1.22
SDC2-207ENST00000522911 ZNF44P15621 663 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 HOXD3P31249 432 aaPredicted RBP7.41□□□□□ -1.22
SDC2-207ENST00000522911 ATP6V1E1P36543 226 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 CAPGP40121 348 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 CDX1P47902 265 aaPredicted RBP7.41□□□□□ -1.22
SDC2-207ENST00000522911 SNRPGP62308 76 aaKnown RBP7.41□□□□□ -1.22
SDC2-207ENST00000522911 MRPL28Q13084 256 aaKnown RBP7.41□□□□□ -1.22
SDC2-207ENST00000522911 KISS1Q15726 138 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 NHLRC3Q5JS37 347 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 MEDAGQ5VYS4 303 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 ZNF529Q6P280 563 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 UNQ9370/PRO34162Q6UXP9 181 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 ASCL4Q6XD76 172 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 AMIGO2Q86SJ2 522 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 TGIF2LXQ8IUE1 241 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 SERPINA12Q8IW75 414 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 IZUMO1Q8IYV9 350 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 LINC00311Q8N616 119 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 Q8N6K4 173 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 OR52M1Q8NGK5 317 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 OR5D14Q8NGL3 314 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 PELI1Q96FA3 418 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 HRASLS5Q96KN8 279 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 LYSTQ99698 3801 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 GON7Q9BXV9 100 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 BARHL1Q9BZE3 327 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 ZCCHC4Q9H5U6 513 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 PALMDQ9NP74 551 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 CALYQ9NYX4 217 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 IDI2-AS1Q9NZ38 188 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 PSG11Q9UQ72 335 aa7.41□□□□□ -1.22
SDC2-207ENST00000522911 LSM4Q9Y4Z0 139 aaKnown RBP7.41□□□□□ -1.22
SDC2-207ENST00000522911 TRAV24A0A0B4J272 114 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 AP4M1O00189 453 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 DEGS1O15121 323 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 SULT1B1O43704 296 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 HTR1AP08908 422 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 POLR2IP36954 125 aaKnown RBP7.4□□□□□ -1.22
SDC2-207ENST00000522911 DGCR2P98153 550 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 FOXE3Q13461 319 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 ALKBH1Q13686 389 aaKnown RBP7.4□□□□□ -1.22
SDC2-207ENST00000522911 KIR2DS1Q14954 304 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 TP53I3Q53FA7 332 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 KLHL22Q53GT1 634 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 KHDC1LQ5JSQ8 128 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 UTF1Q5T230 341 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 RSBN1Q5VWQ0 802 aaPredicted RBP7.4□□□□□ -1.22
SDC2-207ENST00000522911 TEX38Q6PEX7 206 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 SLC35E3Q7Z769 313 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 ZNF329Q86UD4 541 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 ZNF695Q8IW36 515 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 FOXRED2Q8IWF2 684 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 SYS1Q8N2H4 156 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 STPG2Q8N412 459 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 ACBD7Q8N6N7 88 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 OR8H1Q8NGG4 311 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 OR51A4Q8NGJ6 313 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 OR13C9Q8NGT0 318 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 OR56B4Q8NH76 319 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 CNIH3Q8TBE1 160 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 BORCS5Q969J3 196 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 MRPL48Q96GC5 212 aaKnown RBP7.4□□□□□ -1.22
SDC2-207ENST00000522911 CHCHD6Q9BRQ6 235 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 ABCG5Q9H222 651 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 PPIL3Q9H2H8 161 aaKnown RBP7.4□□□□□ -1.22
SDC2-207ENST00000522911 RIBC2Q9H4K1 309 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms