RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 LINC00167Q96N53 147 aa2.59□□□□□ -2
CAST-229ENST00000510098 OR4K3Q96R72 315 aa2.59□□□□□ -2
CAST-229ENST00000510098 RTBDNQ9BSG5 229 aaPredicted RBP2.59□□□□□ -2
CAST-229ENST00000510098 UBQLN4Q9NRR5 601 aa2.59□□□□□ -2
CAST-229ENST00000510098 C19orf12Q9NSK7 152 aa2.59□□□□□ -2
CAST-229ENST00000510098 DEC1Q9P2X7 70 aa2.59□□□□□ -2
CAST-229ENST00000510098 PSG11Q9UQ72 335 aa2.59□□□□□ -2
CAST-229ENST00000510098 CLUHO75153 1309 aa2.58□□□□□ -2
CAST-229ENST00000510098 ZBED9Q6R2W3 1325 aa2.58□□□□□ -2
CAST-229ENST00000510098 FHAD1B1AJZ9 1412 aa2.58□□□□□ -2
CAST-229ENST00000510098 NOTCH2Q04721 2471 aa2.58□□□□□ -2
CAST-229ENST00000510098 PLAC8L1A1L4L8 177 aa2.58□□□□□ -2
CAST-229ENST00000510098 MYBPHLA2RUH7 354 aa2.58□□□□□ -2
CAST-229ENST00000510098 EVPLLA8MZ36 301 aa2.58□□□□□ -2
CAST-229ENST00000510098 DISC1C4P0D8 188 aa2.58□□□□□ -2
CAST-229ENST00000510098 C8orf87E5RJ46 101 aa2.58□□□□□ -2
CAST-229ENST00000510098 FFAR1O14842 300 aa2.58□□□□□ -2
CAST-229ENST00000510098 SLC37A4O43826 429 aa2.58□□□□□ -2
CAST-229ENST00000510098 KLRC4O43908 158 aa2.58□□□□□ -2
CAST-229ENST00000510098 PLIN3O60664 434 aa2.58□□□□□ -2
CAST-229ENST00000510098 NOS1APO75052 506 aaPredicted RBP2.58□□□□□ -2
CAST-229ENST00000510098 INSP01308 110 aa2.58□□□□□ -2
CAST-229ENST00000510098 IFNA14P01570 189 aa2.58□□□□□ -2
CAST-229ENST00000510098 SNRPAP09012 282 aaKnown RBP2.58□□□□□ -2
CAST-229ENST00000510098 GABRA1P14867 456 aa2.58□□□□□ -2
CAST-229ENST00000510098 CBR1P16152 277 aa2.58□□□□□ -2
CAST-229ENST00000510098 ELK4P28324 431 aa2.58□□□□□ -2
CAST-229ENST00000510098 CTRLP40313 264 aa2.58□□□□□ -2
CAST-229ENST00000510098 H2BFSP57053 126 aa2.58□□□□□ -2
CAST-229ENST00000510098 DAD1P61803 113 aa2.58□□□□□ -2
CAST-229ENST00000510098 GRB2P62993 217 aaKnown RBP2.58□□□□□ -2
CAST-229ENST00000510098 S100A12P80511 92 aa2.58□□□□□ -2
CAST-229ENST00000510098 EMX1Q04741 257 aaPredicted RBP2.58□□□□□ -2
CAST-229ENST00000510098 DAZ2Q13117 558 aaKnown RBP2.58□□□□□ -2
CAST-229ENST00000510098 ERCC8Q13216 396 aa2.58□□□□□ -2
CAST-229ENST00000510098 SKP2Q13309 424 aa2.58□□□□□ -2
CAST-229ENST00000510098 BATFQ16520 125 aa2.58□□□□□ -2
CAST-229ENST00000510098 TMEM183BQ1AE95 376 aa2.58□□□□□ -2
CAST-229ENST00000510098 LIN52Q52LA3 116 aa2.58□□□□□ -2
CAST-229ENST00000510098 YIF1BQ5BJH7 314 aa2.58□□□□□ -2
CAST-229ENST00000510098 UBE2NLQ5JXB2 153 aa2.58□□□□□ -2
CAST-229ENST00000510098 SFXN4Q6P4A7 337 aa2.58□□□□□ -2
CAST-229ENST00000510098 ZNF530Q6P9A1 599 aaPredicted RBP2.58□□□□□ -2
CAST-229ENST00000510098 SCGB1D4Q6XE38 83 aa2.58□□□□□ -2
CAST-229ENST00000510098 GALNT10Q86SR1 603 aa2.58□□□□□ -2
CAST-229ENST00000510098 NAA40Q86UY6 237 aa2.58□□□□□ -2
CAST-229ENST00000510098 TMEM183AQ8IXX5 376 aa2.58□□□□□ -2
CAST-229ENST00000510098 MKXQ8IYA7 352 aa2.58□□□□□ -2
CAST-229ENST00000510098 SLC25A45Q8N413 288 aa2.58□□□□□ -2
CAST-229ENST00000510098 LINC00337Q8N6G1 96 aa2.58□□□□□ -2
CAST-229ENST00000510098 OR4M2Q8NGB6 313 aa2.58□□□□□ -2
CAST-229ENST00000510098 OR51D1Q8NGF3 324 aa2.58□□□□□ -2
CAST-229ENST00000510098 DYDC1Q8WWB3 177 aa2.58□□□□□ -2
CAST-229ENST00000510098 GHSRQ92847 366 aa2.58□□□□□ -2
CAST-229ENST00000510098 FAM104AQ969W3 186 aa2.58□□□□□ -2
CAST-229ENST00000510098 TM4SF18Q96CE8 201 aa2.58□□□□□ -2
CAST-229ENST00000510098 ZNF799Q96GE5 643 aa2.58□□□□□ -2
CAST-229ENST00000510098 NRTNQ99748 197 aa2.58□□□□□ -2
CAST-229ENST00000510098 TXNIPQ9H3M7 391 aa2.58□□□□□ -2
CAST-229ENST00000510098 ASB7Q9H672 318 aa2.58□□□□□ -2
CAST-229ENST00000510098 NMNAT1Q9HAN9 279 aaPredicted RBP2.58□□□□□ -2
CAST-229ENST00000510098 PARP11Q9NR21 331 aa2.58□□□□□ -2
CAST-229ENST00000510098 BATF3Q9NR55 127 aa2.58□□□□□ -2
CAST-229ENST00000510098 DAZ3Q9NR90 486 aaKnown RBP2.58□□□□□ -2
CAST-229ENST00000510098 MMP26Q9NRE1 261 aa2.58□□□□□ -2
CAST-229ENST00000510098 ZNF223Q9UK11 482 aaPredicted RBP2.58□□□□□ -2
CAST-229ENST00000510098 NEU3Q9UQ49 428 aa2.58□□□□□ -2
CAST-229ENST00000510098 SLC22A7Q9Y694 548 aa2.58□□□□□ -2
CAST-229ENST00000510098 TMEM131Q92545 1883 aa2.57□□□□□ -2
CAST-229ENST00000510098 A0A1B0GV72 72 aa2.57□□□□□ -2
CAST-229ENST00000510098 BTNL10A8MVZ5 291 aa2.57□□□□□ -2
CAST-229ENST00000510098 KRBOX1C9JBD0 128 aa2.57□□□□□ -2
CAST-229ENST00000510098 D6RAR5 112 aa2.57□□□□□ -2
CAST-229ENST00000510098 NDUFC2-KCTD14E9PQ53 114 aa2.57□□□□□ -2
CAST-229ENST00000510098 PANO1I0J062 215 aa2.57□□□□□ -2
CAST-229ENST00000510098 K7EPK0 472 aa2.57□□□□□ -2
CAST-229ENST00000510098 M0QYV0 167 aa2.57□□□□□ -2
CAST-229ENST00000510098 RTL8CO15255 209 aa2.57□□□□□ -2
CAST-229ENST00000510098 CHP2O43745 196 aa2.57□□□□□ -2
CAST-229ENST00000510098 CA11O75493 328 aa2.57□□□□□ -2
CAST-229ENST00000510098 SERPINB7O75635 380 aa2.57□□□□□ -2
CAST-229ENST00000510098 OR2A4O95047 310 aa2.57□□□□□ -2
CAST-229ENST00000510098 SLC25A14O95258 325 aaPredicted RBP2.57□□□□□ -2
CAST-229ENST00000510098 CYB5R3P00387 301 aaPredicted RBP2.57□□□□□ -2
CAST-229ENST00000510098 IGHV4-34P06331 123 aa2.57□□□□□ -2
CAST-229ENST00000510098 OR4A8P0C604 315 aa2.57□□□□□ -2
CAST-229ENST00000510098 CD36P16671 472 aa2.57□□□□□ -2
CAST-229ENST00000510098 DDTP30046 118 aa2.57□□□□□ -2
CAST-229ENST00000510098 TMEM33P57088 247 aa2.57□□□□□ -2
CAST-229ENST00000510098 RAB4BP61018 213 aa2.57□□□□□ -2
CAST-229ENST00000510098 MEF2CQ06413 473 aaPredicted RBP2.57□□□□□ -2
CAST-229ENST00000510098 EBPQ15125 230 aaKnown RBP2.57□□□□□ -2
CAST-229ENST00000510098 TRMT12Q53H54 448 aaKnown RBP2.57□□□□□ -2
CAST-229ENST00000510098 CENPWQ5EE01 88 aa2.57□□□□□ -2
CAST-229ENST00000510098 ACSBG2Q5FVE4 666 aa2.57□□□□□ -2
CAST-229ENST00000510098 CLLU1OSQ5K130 101 aa2.57□□□□□ -2
CAST-229ENST00000510098 ZNF684Q5T5D7 378 aa2.57□□□□□ -2
CAST-229ENST00000510098 N4BP2L1Q5TBK1 243 aaPredicted RBP2.57□□□□□ -2
CAST-229ENST00000510098 SPATA31B1PQ5VZV4 182 aa2.57□□□□□ -2
CAST-229ENST00000510098 FAM71E1Q6IPT2 247 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms