RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 PRAMEF5Q5TYX0 476 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 SLC35E4Q6ICL7 350 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 BAIAP2L2Q6UXY1 529 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 OR2W3Q7Z3T1 314 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 RTN4RL2Q86UN3 420 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 ZDHHC22Q8N966 263 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 TM2D1Q9BX74 207 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 BARHL1Q9BZE3 327 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 PRDM13Q9H4Q3 707 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 NCOR1P1Q9H4R4 102 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 SPACA1Q9HBV2 294 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 TAS2R3Q9NYW6 316 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 STEAP1Q9UHE8 339 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 PEX16Q9Y5Y5 336 aa14.82□□□□□ -0.04
NPHP4-210ENST00000506941 A0A0B4J203 849 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 LDLRAD4O15165 306 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 PDCD6O75340 191 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 FUT3P21217 361 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 CHATP28329 748 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 SAA4P35542 130 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 GLP1RP43220 463 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 C17orf58Q2M2W7 97 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 C2orf76Q3KRA6 126 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 ZNF497Q6ZNH5 498 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 NEK7Q8TDX7 302 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 C17orf50Q8WW18 174 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 DYRK2Q92630 601 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 AJUBAQ96IF1 538 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 KCTD7Q96MP8 289 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 LPAR5Q9H1C0 372 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 GAL3ST2Q9H3Q3 398 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 HEXA-AS1Q9H8Q6 139 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 OR6C3Q9NZP0 311 aa14.81□□□□□ -0.04
NPHP4-210ENST00000506941 TMEM272A0A1B0GTI8 110 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 DNAJC9-AS1A6NH13 148 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 ZNF729A6NN14 1252 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-210ENST00000506941 MCRIP1C9JLW8 97 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 AIPO00170 330 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 CLEC2LP0C7M8 214 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 SLC2A2P11168 524 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-210ENST00000506941 OMGP23515 440 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 CDK2P24941 298 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 SDC2P34741 201 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 TGFBR1P36897 503 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 KRTAP24-1Q3LI83 254 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 HEPN1Q6WQI6 88 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 MRGPRDQ8TDS7 321 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 DUX5Q96PT3 197 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 MDFIQ99750 246 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 FBLN5Q9UBX5 448 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 SESN1Q9Y6P5 492 aa14.8□□□□□ -0.04
NPHP4-210ENST00000506941 TMEM30CPA0ZSE6 113 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 UBE2QL1A1L167 161 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 MEIOCA2RUB1 952 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 ODF3BA8MYP8 253 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 RBM39Q14498 530 aaKnown RBP14.79□□□□□ -0.04
NPHP4-210ENST00000506941 NKAPLQ5M9Q1 402 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 UTF1Q5T230 341 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 RBMS3Q6XE24 437 aaKnown RBP14.79□□□□□ -0.04
NPHP4-210ENST00000506941 TPRA1Q86W33 373 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 GAPTQ8N292 157 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 FAM89BQ8N5H3 189 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 SULT4A1Q9BR01 284 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 TMEM133Q9H2Q1 129 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 LIN7BQ9HAP6 207 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 ETAA1Q9NY74 926 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 CALYQ9NYX4 217 aa14.79□□□□□ -0.04
NPHP4-210ENST00000506941 KBTBD11-OT1A0A1B0GTJ5 212 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 FAM172BPA6NC97 362 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 FOXI3A8MTJ6 420 aaPredicted RBP14.78□□□□□ -0.04
NPHP4-210ENST00000506941 NOTOA8MTQ0 251 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 SOCS1O15524 211 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 MT-ND4P03905 459 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 GLAP06280 429 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 SSTR5P35346 364 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 EFNB2P52799 333 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 MXD1Q05195 221 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 BAMBIQ13145 260 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 MIDNQ504T8 468 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 Q6YL49 198 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 C6orf201Q7Z4U5 140 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 OR11H6Q8NGC7 330 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 OR13F1Q8NGS4 319 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 OR13D1Q8NGV5 346 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 CCDC107Q8WV48 283 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 JMJD8Q96S16 334 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 LINC00574Q9H8X3 128 aa14.78□□□□□ -0.04
NPHP4-210ENST00000506941 IGHV2-26A0A0B4J1V2 119 aa14.77□□□□□ -0.05
NPHP4-210ENST00000506941 HOXA3O43365 443 aaPredicted RBP14.77□□□□□ -0.05
NPHP4-210ENST00000506941 AIREO43918 545 aa14.77□□□□□ -0.05
NPHP4-210ENST00000506941 IL1AP01583 271 aa14.77□□□□□ -0.05
NPHP4-210ENST00000506941 MELTFP08582 738 aa14.77□□□□□ -0.05
NPHP4-210ENST00000506941 PAX6P26367 422 aa14.77□□□□□ -0.05
NPHP4-210ENST00000506941 BLVRBP30043 206 aaPredicted RBP14.77□□□□□ -0.05
NPHP4-210ENST00000506941 UBA52P62987 128 aaKnown RBP14.77□□□□□ -0.05
NPHP4-210ENST00000506941 SLC9A3R2Q15599 337 aa14.77□□□□□ -0.05
NPHP4-210ENST00000506941 TIMM50Q3ZCQ8 353 aa14.77□□□□□ -0.05
NPHP4-210ENST00000506941 LDLRAD2Q5SZI1 272 aa14.77□□□□□ -0.05
NPHP4-210ENST00000506941 ZNF626Q68DY1 528 aa14.77□□□□□ -0.05
NPHP4-210ENST00000506941 SFXN4Q6P4A7 337 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms