RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 VENTXO95231 258 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 PAHP00439 452 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 FAM90A15PP0C7V4 464 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 FAM90A13PP0C7W8 464 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 FAM90A14PP0C7W9 464 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 FAM90A24PP0C7X0 464 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 IGHV1-8P0DP01 117 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 CD37P11049 281 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 GZMHP20718 246 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 MYL9P24844 172 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 GLIPR1P48060 266 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 ATXN7L3Q14CW9 347 aaPredicted RBP5.94□□□□□ -1.46
GYPB-206ENST00000506516 SSX1Q16384 188 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 TAF9Q16594 264 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 DEFB112Q30KQ8 113 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 MIDNQ504T8 468 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 C1orf100Q5SVJ3 147 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 RUSC1-AS1Q66K80 236 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 OR52W1Q6IF63 320 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 CD200R1LQ6Q8B3 271 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 Q6YL49 198 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 LYPD6Q86Y78 171 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 C11orf42Q8N5U0 333 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 SUMF2Q8NBJ7 301 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 KCNG3Q8TAE7 436 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 FAM216AQ8WUB2 273 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 TNFRSF14Q92956 283 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 SLC25A28Q96A46 364 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 DPCDQ9BVM2 203 aaPredicted RBP5.94□□□□□ -1.46
GYPB-206ENST00000506516 SELENOIQ9C0D9 397 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 PRDM13Q9H4Q3 707 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 NCOR1P1Q9H4R4 102 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 BANF2Q9H503 90 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 ING3Q9NXR8 418 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 SSR3Q9UNL2 185 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 AK6Q9Y3D8 172 aaKnown RBP5.94□□□□□ -1.46
GYPB-206ENST00000506516 V9GY05 133 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 ABCA2Q9BZC7 2435 aa5.94□□□□□ -1.46
GYPB-206ENST00000506516 MEIKINA0A087WXM9 373 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 TRAV1-2A0A0B4J238 106 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 A0A0U1RQK1 487 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 MEX3AA1L020 520 aaKnown RBP5.93□□□□□ -1.46
GYPB-206ENST00000506516 ZNF729A6NN14 1252 aaPredicted RBP5.93□□□□□ -1.46
GYPB-206ENST00000506516 CLDN34H7C241 214 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 SLC22A1O15245 554 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 MPIG6BO95866 241 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 GLAP06280 429 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 FBP1P09467 338 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 ARSBP15848 533 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 MGMTP16455 207 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 FUT3P21217 361 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 FGF9P31371 208 aaPredicted RBP5.93□□□□□ -1.46
GYPB-206ENST00000506516 DLX1P56177 255 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 DLX6P56179 175 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 SRSF2Q01130 221 aaKnown RBP5.93□□□□□ -1.46
GYPB-206ENST00000506516 PAX5Q02548 391 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 KLRD1Q13241 179 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 DYNC1I2Q13409 638 aaKnown RBP5.93□□□□□ -1.46
GYPB-206ENST00000506516 NEDD8Q15843 81 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 RAB11BQ15907 218 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 SYT6Q5T7P8 510 aaPredicted RBP5.93□□□□□ -1.46
GYPB-206ENST00000506516 SLC35E4Q6ICL7 350 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 RTN4RL2Q86UN3 420 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 PNKDQ8N490 385 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 TMEM86BQ8N661 226 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 ZDHHC22Q8N966 263 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 TMEM104Q8NE00 496 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 TSPAN14Q8NG11 270 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 NEK7Q8TDX7 302 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 ZNF48Q96MX3 618 aaPredicted RBP5.93□□□□□ -1.46
GYPB-206ENST00000506516 NEDD4LQ96PU5 975 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 URM1Q9BTM9 101 aaKnown RBP5.93□□□□□ -1.46
GYPB-206ENST00000506516 DPAGT1Q9H3H5 408 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 STUB1Q9UNE7 303 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 PEX16Q9Y5Y5 336 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 SOX21Q9Y651 276 aaPredicted RBP5.93□□□□□ -1.46
GYPB-206ENST00000506516 SESN1Q9Y6P5 492 aa5.93□□□□□ -1.46
GYPB-206ENST00000506516 ARHGAP32A7KAX9 2087 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 SONP18583 2426 aaKnown RBP5.92□□□□□ -1.46
GYPB-206ENST00000506516 KBTBD11-OT1A0A1B0GTJ5 212 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 MDFIC2A0A1B0GVS7 189 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 TMEM30CPA0ZSE6 113 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 BTBD17A6NE02 478 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 DNAJC9-AS1A6NH13 148 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 TMEM14DPA8MWL7 114 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 SLC17A2O00624 439 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 HOXA3O43365 443 aaPredicted RBP5.92□□□□□ -1.46
GYPB-206ENST00000506516 CA11O75493 328 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 CLPXO76031 633 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 ARG1P05089 322 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 CRYBA1P05813 215 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 MELTFP08582 738 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 CD36P16671 472 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 RAB3BP20337 219 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 COX7A1P24310 79 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 CDK2P24941 298 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 SAA4P35542 130 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 PRRX1P54821 245 aa5.92□□□□□ -1.46
GYPB-206ENST00000506516 UBA52P62987 128 aaKnown RBP5.92□□□□□ -1.46
GYPB-206ENST00000506516 PRB3Q04118 309 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms