RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 NOSIPQ9Y314 301 aaKnown RBP11.33□□□□□ -0.59
TNXB-206ENST00000490077 UMAD1C9J7I0 102 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 CHST1O43916 411 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 VAMP5O95183 116 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 WNT5AP41221 380 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 DVL1P1P54792 670 aaPredicted RBP11.33□□□□□ -0.6
TNXB-206ENST00000490077 FGF8P55075 233 aaPredicted RBP11.33□□□□□ -0.6
TNXB-206ENST00000490077 ARL16Q0P5N6 197 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 MALLQ13021 153 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 PPA1Q15181 289 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 Q6ZSR3 168 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 OR4D5Q8NGN0 318 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 M1APQ8TC57 530 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 BOD1Q96IK1 185 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 UBE2J1Q9Y385 318 aaPredicted RBP11.33□□□□□ -0.6
TNXB-206ENST00000490077 LINC00587B1AMM8 73 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 SNAPC5O75971 98 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 IAPPP10997 89 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 TDGF1P13385 188 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 FUT3P21217 361 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 CA6P23280 308 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 SRD5A2P31213 254 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 HOXA6P31267 233 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 PMP22Q01453 160 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 SMCO1Q147U7 214 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 EXT1Q16394 746 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 RNFT1Q5M7Z0 435 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 SPSB3Q6PJ21 355 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 SELENOHQ8IZQ5 122 aaKnown RBP11.33□□□□□ -0.6
TNXB-206ENST00000490077 UBAC2Q8NBM4 344 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 CPT1CQ8TCG5 803 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 SPSB1Q96BD6 273 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 SCGB3A2Q96PL1 93 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 IER2Q9BTL4 223 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 RSG1Q9BU20 258 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 PARP11Q9NR21 331 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 GHRLQ9UBU3 117 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 KCNIP3Q9Y2W7 256 aa11.33□□□□□ -0.6
TNXB-206ENST00000490077 KLF2Q9Y5W3 355 aaPredicted RBP11.33□□□□□ -0.6
TNXB-206ENST00000490077 A0A087WZY1 265 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 C9orf172C9J069 976 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 WRBO00258 174 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 MRPL33O75394 65 aaKnown RBP11.32□□□□□ -0.6
TNXB-206ENST00000490077 JTBO76095 146 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 PAX9P55771 341 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 ASCL4Q6XD76 172 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 WDR5BQ86VZ2 330 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 SAT2Q96F10 170 aaPredicted RBP11.32□□□□□ -0.6
TNXB-206ENST00000490077 DEFB127Q9H1M4 99 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 RNF150Q9ULK6 438 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 LOXL2Q9Y4K0 774 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 YIF1AO95070 293 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 HERV-K104P61576 105 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 OR8B8Q15620 311 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 KRTAP27-1Q3LI81 207 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 OR2G3Q8NGZ4 309 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 C11orf1Q9H5F2 150 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 ZNF286AQ9HBT8 521 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 TAAR3PQ9P1P4 343 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 FZR1Q9UM11 496 aa11.32□□□□□ -0.6
TNXB-206ENST00000490077 TRAV24A0A0B4J272 114 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 E5RGE8 158 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 ST8SIA3O43173 380 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 LAMTOR5O43504 91 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 PSG2P11465 335 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 CYB561P49447 251 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 LHX2P50458 406 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 RAB1AP62820 205 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 SPINK9Q5DT21 86 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 PDZD11Q5EBL8 140 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 GFI1BQ5VTD9 330 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 ABLIM2Q6H8Q1 611 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 LYPD6BQ8NI32 183 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 PPP1R3CQ9UQK1 317 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 MEMO1Q9Y316 297 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 NSG2Q9Y328 171 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 ABCA1O95477 2261 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 ZFHX3Q15911 3703 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 ZNF816-ZNF321PA0A0X1KG74 233 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 IGKV1-39P01597 117 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 IGHV3-13P01766 116 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 IGHV3-7P01780 117 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 IGKV1D-39P04432 117 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 ZNF16P17020 682 aaPredicted RBP11.31□□□□□ -0.6
TNXB-206ENST00000490077 FUT6P51993 359 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 CLDN18P56856 261 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 CNN3Q15417 329 aaKnown RBP11.31□□□□□ -0.6
TNXB-206ENST00000490077 SURF2Q15527 256 aaPredicted RBP11.31□□□□□ -0.6
TNXB-206ENST00000490077 PCSK4Q6UW60 755 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 LHFPL2Q6ZUX7 228 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 WDR86Q86TI4 376 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 GCNT2Q8N0V5 402 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 OR2C3Q8N628 320 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 TMEM252Q8N6L7 170 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 TPRX1Q8N7U7 411 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 GALNT14Q96FL9 552 aa11.31□□□□□ -0.6
TNXB-206ENST00000490077 ERRFI1Q9UJM3 462 aaPredicted RBP11.31□□□□□ -0.6
TNXB-206ENST00000490077 INTS1Q8N201 2190 aaKnown RBP11.31□□□□□ -0.6
TNXB-206ENST00000490077 BMP5P22003 454 aa11.3□□□□□ -0.6
TNXB-206ENST00000490077 P2RY1P47900 373 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms