RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 SOCS1O15524 211 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 PDCD6O75340 191 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 MMP23AO75900 390 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 CHATP28329 748 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 BLVRBP30043 206 aaPredicted RBP12.39□□□□□ -0.43
FDPS-213ENST00000489003 RPS19P39019 145 aaKnown RBP12.39□□□□□ -0.43
FDPS-213ENST00000489003 EFNB2P52799 333 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 TMEM50BP56557 158 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 KLRD1Q13241 179 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 C17orf58Q2M2W7 97 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 SFXN4Q6P4A7 337 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 TRAPPC6BQ86SZ2 158 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 ANKRD13BQ86YJ7 626 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 ZNF565Q8N9K5 539 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 OR13A1Q8NGR1 328 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 NEK7Q8TDX7 302 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 FAAP24Q9BTP7 215 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 NAA50Q9GZZ1 169 aaKnown RBP12.39□□□□□ -0.43
FDPS-213ENST00000489003 LIN7BQ9HAP6 207 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 TAS2R3Q9NYW6 316 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 OR6C3Q9NZP0 311 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 DAPK2Q9UIK4 370 aa12.39□□□□□ -0.43
FDPS-213ENST00000489003 A0A1W2PRD5 423 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 A0A1W2PRF3 423 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 A0A1W2PRM7 423 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 TMEM30CPA0ZSE6 113 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 FOXI3A8MTJ6 420 aaPredicted RBP12.38□□□□□ -0.43
FDPS-213ENST00000489003 IFNA2P01563 188 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 RBP4P02753 201 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 IGHV1-8P0DP01 117 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 VEGFCP49767 419 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 UBE2E1P51965 193 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 SCGB2A2Q13296 93 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 NKAPLQ5M9Q1 402 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 NCR3LG1Q68D85 454 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 ZNF782Q6ZMW2 699 aaPredicted RBP12.38□□□□□ -0.43
FDPS-213ENST00000489003 ZNF497Q6ZNH5 498 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 SLC16A12Q6ZSM3 486 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 C6orf201Q7Z4U5 140 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 GPR141Q7Z602 305 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 PNKDQ8N490 385 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 CCDC107Q8WV48 283 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 DYRK2Q92630 601 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 ZNF48Q96MX3 618 aaPredicted RBP12.38□□□□□ -0.43
FDPS-213ENST00000489003 NEDD4LQ96PU5 975 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 SLC6A7Q99884 636 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 SULT4A1Q9BR01 284 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 HEXA-AS1Q9H8Q6 139 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 ETAA1Q9NY74 926 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 JMJD1CQ15652 2540 aa12.38□□□□□ -0.43
FDPS-213ENST00000489003 C2CD3Q4AC94 2353 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 CUBNO60494 3623 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 ZNF729A6NN14 1252 aaPredicted RBP12.37□□□□□ -0.43
FDPS-213ENST00000489003 GDNFP39905 211 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 VBP1P61758 197 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 NCS1P62166 190 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 GUCA2AQ02747 115 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 IDNKQ5T6J7 187 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 GPR107Q5VW38 600 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 HEPN1Q6WQI6 88 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 Q6ZTK2 550 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 RTN4RL2Q86UN3 420 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 GAPTQ8N292 157 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 MRGPRDQ8TDS7 321 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 PTX4Q96A99 478 aa12.37□□□□□ -0.43
FDPS-213ENST00000489003 KBTBD11-OT1A0A1B0GTJ5 212 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 NPIPB11E5RHQ5 1161 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 CA11O75493 328 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 PAHP00439 452 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 SNRPBP14678 240 aaKnown RBP12.36□□□□□ -0.43
FDPS-213ENST00000489003 RAB6AP20340 208 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 GZMHP20718 246 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 OMGP23515 440 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 COX7A1P24310 79 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 CDK2P24941 298 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 RPL5P46777 297 aaKnown RBP12.36□□□□□ -0.43
FDPS-213ENST00000489003 CTF1Q16619 201 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 DEFB112Q30KQ8 113 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 PLAC9Q5JTB6 97 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 BAIAP2L2Q6UXY1 529 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 OR56B1Q8NGI3 324 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 GAL3ST2Q9H3Q3 398 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 PRDM13Q9H4Q3 707 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 LINC00574Q9H8X3 128 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 PLEKHJ1Q9NW61 149 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 HSF4Q9ULV5 492 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 SESN1Q9Y6P5 492 aa12.36□□□□□ -0.43
FDPS-213ENST00000489003 RAB27BO00194 218 aa12.35□□□□□ -0.43
FDPS-213ENST00000489003 NPFFO15130 113 aa12.35□□□□□ -0.43
FDPS-213ENST00000489003 CLPXO76031 633 aa12.35□□□□□ -0.43
FDPS-213ENST00000489003 IL1AP01583 271 aa12.35□□□□□ -0.43
FDPS-213ENST00000489003 GLP1RP43220 463 aa12.35□□□□□ -0.43
FDPS-213ENST00000489003 SERPINB10P48595 397 aa12.35□□□□□ -0.43
FDPS-213ENST00000489003 MOGAT2Q3SYC2 334 aa12.35□□□□□ -0.43
FDPS-213ENST00000489003 UTF1Q5T230 341 aa12.35□□□□□ -0.43
FDPS-213ENST00000489003 PRAMEF5Q5TYX0 476 aa12.35□□□□□ -0.43
FDPS-213ENST00000489003 USP43Q70EL4 1123 aa12.35□□□□□ -0.43
FDPS-213ENST00000489003 SIGLECL1Q8N7X8 197 aa12.35□□□□□ -0.43
FDPS-213ENST00000489003 OR5H6Q8NGV6 325 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms