RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ADARB2-AS1A8MUL3 147 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 J3QR06 171 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 GEMIN2O14893 280 aaKnown RBP9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 OR7C1O76099 320 aaPredicted RBP9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 IL1AP01583 271 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 CSTBP04080 98 aaKnown RBP9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 LPLP06858 475 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 MNDAP41218 407 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 RBM11P57052 281 aaKnown RBP9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 ST3GAL4Q11206 333 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 RCN1Q15293 331 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 BEAN1Q3B7T3 259 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 DMKNQ6E0U4 476 aaPredicted RBP9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 CCDC144NLQ6NUI1 221 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 C16orf82Q7Z2V1 217 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 OSR2Q8N2R0 312 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 PACRGLQ8N7B6 248 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 SETD9Q8NE22 299 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 RPEQ96AT9 228 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 AKR1E2Q96JD6 320 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 RBM14Q96PK6 669 aaKnown RBP9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 S100A13Q99584 98 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 ZNF184Q99676 751 aaPredicted RBP9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 LINC00574Q9H8X3 128 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 PSG11Q9UQ72 335 aa9.53□□□□□ -0.88
CCHCR1-215ENST00000488920 TRAV8-7A0A075B6U6 113 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 TRBV5-5A0A0J9YX44 114 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 PNMA8CA0A1B0GUJ8 204 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 A0A1W2PP11 408 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 MAGEA13PA6NCF6 341 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 OOSP1A8MZH6 123 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 NPIPB11E5RHQ5 1161 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 OR2F2O95006 317 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 PRB2P02812 416 aaPredicted RBP9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 AMY1AP04745 511 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 AMY2AP04746 511 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 GNAO1P09471 354 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 FAM106CPP0CH98 169 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 IGFBP3P17936 291 aaPredicted RBP9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 SERPINA2P20848 420 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 SSTR5P35346 364 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 KCNJ3P48549 501 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 GNG10P50151 68 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 RPS11P62280 158 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 MED21Q13503 144 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 RIPK1Q13546 671 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 DIAPH2-AS1Q14236 149 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 SLC22A6Q4U2R8 563 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 NHLRC3Q5JS37 347 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 C9orf152Q5JTZ5 239 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 ATAD3CQ5T2N8 411 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 SAMD5Q5TGI4 173 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 LAIR2Q6ISS4 152 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 ZNF485Q8NCK3 441 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 OR4F17Q8NGA8 305 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 TOMM40LQ969M1 308 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 OR4F4Q96R69 305 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 C8orf4Q9NR00 106 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 IL36GQ9NZH8 169 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 CKLFQ9UBR5 152 aa9.52□□□□□ -0.89
CCHCR1-215ENST00000488920 PRKDCP78527 4128 aaKnown RBP9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 A0A1W2PPE3 182 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 EFCAB10A6NFE3 127 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 XPNPEP2O43895 674 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 GPX5O75715 221 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 GZMHP20718 246 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 CAPGP40121 348 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 CD83Q01151 205 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 PAX5Q02548 391 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 MADCAM1Q13477 382 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 HNF4GQ14541 408 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 Q499Y3 187 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 YIF1BQ5BJH7 314 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 OXLD1Q5BKU9 147 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 KIAA2026Q5HYC2 2103 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 TCTEX1D4Q5JR98 221 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 DRAM1Q8N682 238 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 OR56B4Q8NH76 319 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 UBALD1Q8TB05 177 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 CCDC107Q8WV48 283 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 PGLYRP3Q96LB9 341 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 OR14A2Q96R54 314 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 IFT22Q9H7X7 185 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 PCDHB16Q9NRJ7 776 aa9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 PAK1IP1Q9NWT1 392 aaPredicted RBP9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 AMMECR1Q9Y4X0 333 aaPredicted RBP9.51□□□□□ -0.89
CCHCR1-215ENST00000488920 TRBV5-7A0A0A0MS05 114 aa9.5□□□□□ -0.89
CCHCR1-215ENST00000488920 TCRBV4S1A1TA0A5B7 111 aa9.5□□□□□ -0.89
CCHCR1-215ENST00000488920 TMEM30CPA0ZSE6 113 aa9.5□□□□□ -0.89
CCHCR1-215ENST00000488920 FAM90A18PA6NE21 464 aa9.5□□□□□ -0.89
CCHCR1-215ENST00000488920 FAM90A16PA6NEW6 464 aa9.5□□□□□ -0.89
CCHCR1-215ENST00000488920 FAM90A20PA6NIJ5 464 aa9.5□□□□□ -0.89
CCHCR1-215ENST00000488920 FAM90A9PA6NNJ1 464 aa9.5□□□□□ -0.89
CCHCR1-215ENST00000488920 FAM90A12PA8MX19 464 aa9.5□□□□□ -0.89
CCHCR1-215ENST00000488920 FAM90A5PA8MXJ8 464 aa9.5□□□□□ -0.89
CCHCR1-215ENST00000488920 ZNF780AO75290 641 aaPredicted RBP9.5□□□□□ -0.89
CCHCR1-215ENST00000488920 MT-ND4P03905 459 aa9.5□□□□□ -0.89
CCHCR1-215ENST00000488920 SNRNP70P08621 437 aaKnown RBP9.5□□□□□ -0.89
CCHCR1-215ENST00000488920 FAM90A15PP0C7V4 464 aa9.5□□□□□ -0.89
CCHCR1-215ENST00000488920 FAM90A13PP0C7W8 464 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms