RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ELP2Q6IA86 826 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 LAIR2Q6ISS4 152 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 CLEC20AQ6ZU45 233 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 LYZL2Q7Z4W2 148 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 MARCH3Q86UD3 253 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 EIF4E3Q8N5X7 224 aaKnown RBP2.3□□□□□ -2.04
SMC4-218ENST00000486711 FER1L6-AS1Q8NA97 138 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 ANGPTL6Q8NI99 470 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 APOBEC3DQ96AK3 386 aaPredicted RBP2.3□□□□□ -2.04
SMC4-218ENST00000486711 HBEGFQ99075 208 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 EBPLQ9BY08 206 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 BCL2L14Q9BZR8 327 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 NDEL1Q9GZM8 345 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 ZNF586Q9NXT0 402 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 CD300AQ9UGN4 299 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 MCTS1Q9ULC4 181 aaKnown RBP2.3□□□□□ -2.04
SMC4-218ENST00000486711 HIVEP2P31629 2446 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 LRPPRCP42704 1394 aaKnown RBP2.29□□□□□ -2.04
SMC4-218ENST00000486711 A0A1W2PNN7 141 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 A6NED7 52 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 OR5H14A6NHG9 310 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 ARGFXA6NJG6 315 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 TRPC5OSA6NMA1 111 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 EFCAB9A8MZ26 197 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 GP1BAP07359 652 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 LIMS3P0CW19 117 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 LIMS4P0CW20 117 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 GABRA1P14867 456 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 ZNF708P17019 499 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 KDELR2P33947 212 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 TGFBR2P37173 567 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 ACTR1BP42025 376 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 SLC9A3R2Q15599 337 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 ZBTB6Q15916 424 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 BRD3OSQ6XYD6 125 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 CRLF3Q8IUI8 442 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 SELENOHQ8IZQ5 122 aaKnown RBP2.29□□□□□ -2.04
SMC4-218ENST00000486711 MAL2Q969L2 176 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 CMBLQ96DG6 245 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 REEP6Q96HR9 211 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 IGF2BP2-AS1Q96M15 143 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 DMAC2Q9NW81 257 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 TBL2Q9Y4P3 447 aaKnown RBP2.29□□□□□ -2.04
SMC4-218ENST00000486711 GMEB1Q9Y692 573 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 URGCP-MRPS24S4R325 110 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 THADAQ6YHU6 1953 aa2.29□□□□□ -2.04
SMC4-218ENST00000486711 ATRNO75882 1429 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 SPATA31E1Q6ZUB1 1445 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 KIAA0232Q92628 1395 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 SEC16AO15027 2179 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 IQCF5A8MTL0 148 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 GGTLC3B5MD39 225 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 F8VZ95 297 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 TMEM250H0YL14 139 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 H3BMM0 161 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 PHYHO14832 338 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 LIN7AO14910 233 aaPredicted RBP2.28□□□□□ -2.04
SMC4-218ENST00000486711 FGF16O43320 207 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 PSCAO43653 123 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 UGT2B11O75310 529 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 CPSF4O95639 269 aaKnown RBP2.28□□□□□ -2.04
SMC4-218ENST00000486711 GYPCP04921 128 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 P0C880 135 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 MP68P56378 58 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 RAB8AP61006 207 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 RAB2AP61019 212 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 CASP8Q14790 479 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 PAFAH1B3Q15102 231 aaKnown RBP2.28□□□□□ -2.04
SMC4-218ENST00000486711 MMDQ15546 238 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 ZCWPW2Q504Y3 356 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 SPPL2BQ8TCT7 592 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 UBE2WQ96B02 151 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 SLC25A44Q96H78 314 aaPredicted RBP2.28□□□□□ -2.04
SMC4-218ENST00000486711 TRIB3Q96RU7 358 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 ASCL3Q9NQ33 180 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 KCNIP2Q9NS61 270 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 MS4A12Q9NXJ0 267 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 DYSFO75923 2080 aa2.28□□□□□ -2.04
SMC4-218ENST00000486711 POLR3GO15318 223 aaPredicted RBP2.27□□□□□ -2.05
SMC4-218ENST00000486711 SLC31A1O15431 190 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 AQP9O43315 295 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 RAB36O95755 333 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 PVALBP20472 110 aaPredicted RBP2.27□□□□□ -2.05
SMC4-218ENST00000486711 COL8A2P25067 703 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 C1QTNF8P60827 252 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 PMS2P3Q13401 168 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 OR4P4Q8NGL7 312 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 OR5AK3PQ8NH89 298 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 DYNC2LI1Q8TCX1 351 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 RNASEH2CQ8TDP1 164 aaKnown RBP2.27□□□□□ -2.05
SMC4-218ENST00000486711 TMEM56Q96MV1 263 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 TRNT1Q96Q11 434 aaKnown RBP2.27□□□□□ -2.05
SMC4-218ENST00000486711 PKMYT1Q99640 499 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 PRSS27Q9BQR3 290 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 OR2D2Q9H210 308 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 OR51E2Q9H255 320 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 SPACA1Q9HBV2 294 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 FBXL3Q9UKT7 428 aa2.27□□□□□ -2.05
SMC4-218ENST00000486711 TRBV24-1A0A075B6N3 115 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms